RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SCD5Q86SK9 330 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 MARK1Q9P0L2 795 aa26.64■■□□□ 1.86
VEGFA-208ENST00000417285 ANTXRLA6NF34 631 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 BYSLQ13895 437 aaKnown RBP26.63■■□□□ 1.85
VEGFA-208ENST00000417285 SF3A2Q15428 464 aaKnown RBP26.63■■□□□ 1.85
VEGFA-208ENST00000417285 MDGA1Q8NFP4 955 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 OLIG1Q8TAK6 271 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 CEP63Q96MT8 703 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 BBS2Q9BXC9 721 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 KIAA1257Q9ULG3 409 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 STARD13Q9Y3M8 1113 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 RALGAPA1Q6GYQ0 2036 aa26.63■■□□□ 1.85
VEGFA-208ENST00000417285 BCLAF3A2AJT9 711 aaKnown RBP26.62■■□□□ 1.85
VEGFA-208ENST00000417285 GADD45BO75293 160 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-208ENST00000417285 CUL2Q13617 745 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 GRAMD4Q6IC98 578 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 TTC30AQ86WT1 665 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 TERB1Q8NA31 727 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 SLC35C1Q96A29 364 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 ARID3AQ99856 593 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 TPSD1Q9BZJ3 242 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 DCLK3Q9C098 648 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 INVSQ9Y283 1065 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 MYH10P35580 1976 aa26.62■■□□□ 1.85
VEGFA-208ENST00000417285 CACNG3O60359 315 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 TYRP14679 529 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 CD44P16070 742 aaKnown RBP26.61■■□□□ 1.85
VEGFA-208ENST00000417285 CREB5Q02930 508 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 CCDC6Q16204 474 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 RAB41Q5JT25 222 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 C10orf76Q5T2E6 689 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 PMS2CLQ68D20 193 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 IL31Q6EBC2 164 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 KLHL10Q6JEL2 608 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 Q6ZNB5 142 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 PIGZQ86VD9 579 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 ZNF513Q8N8E2 541 aaPredicted RBP26.61■■□□□ 1.85
VEGFA-208ENST00000417285 DNAJC17Q9NVM6 304 aaKnown RBP26.61■■□□□ 1.85
VEGFA-208ENST00000417285 NUDT5Q9UKK9 219 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 MYOFQ9NZM1 2061 aa26.61■■□□□ 1.85
VEGFA-208ENST00000417285 BICDL2A1A5D9 508 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 NEDD8-MDP1E9PL57 170 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 ADAM23O75077 832 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 CAVIN2O95810 425 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 HNRNPLP14866 589 aaKnown RBP eCLIP26.6■■□□□ 1.85
VEGFA-208ENST00000417285 TBXAS1P24557 533 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-208ENST00000417285 CCDC40Q4G0X9 1142 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 SDE2Q6IQ49 451 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 FOXR2Q6PJQ5 311 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 TPGS1Q6ZTW0 290 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 MIB1Q86YT6 1006 aa26.6■■□□□ 1.85
VEGFA-208ENST00000417285 BCCIPQ9P287 314 aaKnown RBP eCLIP26.6■■□□□ 1.85
VEGFA-208ENST00000417285 MDM4O15151 490 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 PMM2O15305 246 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 ZBTB24O43167 697 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-208ENST00000417285 STC2O76061 302 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 NTSR1P30989 418 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 CHKAP35790 457 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 MORC3Q14149 939 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 SGO2Q562F6 1265 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 PM20D1Q6GTS8 502 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 NELFBQ8WX92 580 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 SPACA7Q96KW9 195 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 HESX1Q9UBX0 185 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 STRIP2Q9ULQ0 834 aa26.59■■□□□ 1.85
VEGFA-208ENST00000417285 MAP3K13O43283 966 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 ZBED1O96006 694 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 P2RY2P41231 377 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 TKTL1P51854 596 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 CETN1Q12798 172 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 SPDYCQ5MJ68 293 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 TTI2Q6NXR4 508 aa26.58■■□□□ 1.85
VEGFA-208ENST00000417285 CNOT1A5YKK6 2376 aaKnown RBP26.58■■□□□ 1.85
VEGFA-208ENST00000417285 PPP1R3GB7ZBB8 358 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 BIN1O00499 593 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 XPO1O14980 1071 aaKnown RBP26.57■■□□□ 1.84
VEGFA-208ENST00000417285 VDRP11473 427 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 BMP6P22004 513 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 FMO5P49326 533 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 BCAT1P54687 386 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 YWHAGP61981 247 aaKnown RBP eCLIP26.57■■□□□ 1.84
VEGFA-208ENST00000417285 EFEMP1Q12805 493 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 PPM1JQ5JR12 505 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 STPG1Q5TH74 334 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 RSRC2Q7L4I2 434 aaKnown RBP26.57■■□□□ 1.84
VEGFA-208ENST00000417285 PGBD3Q8N328 593 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 HMGB4Q8WW32 186 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 MARCH2Q9P0N8 246 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 RASAL2Q9UJF2 1139 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 FBXO10Q9UK96 956 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 CTNND2Q9UQB3 1225 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 MYO16Q9Y6X6 1858 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 LAMA1P25391 3075 aa26.57■■□□□ 1.84
VEGFA-208ENST00000417285 TCRBV21S2A2A0A5A6 115 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 TRIM24O15164 1050 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 KLKB1P03952 638 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 CISD3P0C7P0 127 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 DGKGP49619 791 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 UBE2HP62256 183 aa26.56■■□□□ 1.84
VEGFA-208ENST00000417285 GOLGA7BQ2TAP0 167 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms