RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 OR6B2Q6IFH4 312 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 TOGARAM2Q6ZUX3 1019 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 HFE2Q6ZVN8 426 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 RIN3Q8TB24 985 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 CPA5Q8WXQ8 436 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 OTUB2Q96DC9 234 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 MSANTD3Q96H12 275 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 RBSNQ9H1K0 784 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 C8orf33Q9H7E9 229 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 HEBP1Q9NRV9 189 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 SEPT11Q9NVA2 429 aaKnown RBP24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 ASNSD1Q9NWL6 643 aa24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 LUC7L2Q9Y383 392 aaKnown RBP24.16■■□□□ 1.46
SMARCB1-205ENST00000417137 STK25O00506 426 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 MAN2B1O00754 1011 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 MDM4O15151 490 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 CYP1A1P04798 512 aaPredicted RBP24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 IRF1P10914 325 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 NCAM1P13591 858 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 GABRB2P47870 512 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 NOMO3P69849 1222 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 AMPD2Q01433 879 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 TRIM14Q14142 442 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 PTPN20Q4JDL3 420 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 NAA35Q5VZE5 725 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 C1orf228Q6PIY5 440 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 SARM1Q6SZW1 724 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 HTR3DQ70Z44 454 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 CPA6Q8N4T0 437 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 CPLX3Q8WVH0 158 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 SYN2Q92777 582 aaPredicted RBP24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 TRIM5Q9C035 493 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 EBF3Q9H4W6 596 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 POPDC2Q9HBU9 364 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 WNT6Q9Y6F9 365 aa24.15■■□□□ 1.46
SMARCB1-205ENST00000417137 SLC12A8A0AV02 714 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 KRBA1A5PL33 1030 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 PRR33A8MZF0 331 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 NFATC1O95644 943 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 ERBB2P04626 1255 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 TPM1P09493 284 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 TNFAIP3P21580 790 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 STARD6P59095 220 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 SLC6A3Q01959 620 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 MSANTD2Q6P1R3 559 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 DCLK3Q9C098 648 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 LINC00597Q9H2U6 94 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 GTSE1Q9NYZ3 720 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 TJP2Q9UDY2 1190 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 ZNF510Q9Y2H8 683 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 MRPS17Q9Y2R5 130 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 HBS1LQ9Y450 684 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 BZW2Q9Y6E2 419 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 PIAS3Q9Y6X2 628 aa24.14■■□□□ 1.45
SMARCB1-205ENST00000417137 FAM86C2PA6NEL3 165 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 HSF2BPO75031 334 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 NSFP46459 744 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 TNK2Q07912 1038 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 KLHL30Q0D2K2 578 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 EML3Q32P44 896 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 TRIM68Q6AZZ1 485 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 PPP1R2P3Q6NXS1 205 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 ZNF852Q6ZMS4 543 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 TPRG1Q6ZUI0 275 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 FAM183BPQ6ZVS7 135 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 ADGRG2Q8IZP9 1017 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 NELL2Q99435 816 aa24.13■■□□□ 1.45
SMARCB1-205ENST00000417137 STC2O76061 302 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 ARSAP15289 507 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 SCNN1AP37088 669 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 PRKCIP41743 596 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 CLEC16AQ2KHT3 1053 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 OLFML1Q6UWY5 402 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 RALGPS2Q86X27 583 aaPredicted RBP24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 GAS2L3Q86XJ1 694 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 VSTM4Q8IW00 320 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 FLCNQ8NFG4 579 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 EXOC4Q96A65 974 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 PLD4Q96BZ4 506 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 PCDHB18PQ96TA0 734 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 HAUS4Q9H6D7 363 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 ECT2Q9H8V3 914 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 HPS4Q9NQG7 708 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 SFMBT1Q9UHJ3 866 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 NAALADL1Q9UQQ1 740 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 MYO16Q9Y6X6 1858 aa24.12■■□□□ 1.45
SMARCB1-205ENST00000417137 GYPCP04921 128 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 HMBSP08397 361 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 UNGP13051 313 aaPredicted RBP24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 HARS2P49590 506 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 SLC26A9Q7LBE3 791 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 SUGP1Q8IWZ8 645 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 FBXL6Q8N531 539 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 TTC8Q8TAM2 541 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 TBC1D17Q9HA65 648 aa24.11■■□□□ 1.45
SMARCB1-205ENST00000417137 KANSL1LA0AUZ9 987 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 FYNP06241 537 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 MMP8P22894 467 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 CASP14P31944 242 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 CENPCQ03188 943 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms