RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 FLRT2O43155 660 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 TLX3O43711 291 aaPredicted RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 CACNG3O60359 315 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 TLR5O60602 858 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 LDHAP00338 332 aaKnown RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 CISD3P0C7P0 127 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 GARTP22102 1010 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 TNNC1P63316 161 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 STARD3Q14849 445 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 DUOXA2Q1HG44 320 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 PREPLQ4J6C6 727 aaPredicted RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 PRAMEF14Q5SWL7 426 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 DPH6Q7L8W6 267 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 TRAPPC11Q7Z392 1133 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF605Q86T29 641 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 FAM35AQ86V20 835 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 ZNF843Q8N446 348 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 KIAA1958Q8N8K9 716 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 B3GALNT2Q8NCR0 500 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 PDZD8Q8NEN9 1154 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 CCDC127Q96BQ5 260 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 DNAJC19Q96DA6 116 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 XPO6Q96QU8 1125 aaKnown RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 CDC6Q99741 560 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 C6orf106Q9H6K1 298 aaPredicted RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 OSER1Q9NX31 292 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 USP36Q9P275 1121 aaKnown RBP9.9□□□□□ -0.82
LINC01238-201ENST00000416204 DKK4Q9UBT3 224 aa9.9□□□□□ -0.82
LINC01238-201ENST00000416204 METTL12A8MUP2 240 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 H0Y8X5 98 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 CYP26A1O43174 497 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 AP1G2O75843 785 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 BEST1O76090 585 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 DKK1O94907 266 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 RTN3O95197 1032 aaPredicted RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 HMBSP08397 361 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 HLA-EP13747 358 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 CCDC130P13994 396 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 PRKCHP24723 683 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 GJB2P29033 226 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 LONP1P36776 959 aaKnown RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 MYL6P60660 151 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 GEN1Q17RS7 908 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 PAQR9Q6ZVX9 377 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 GPRIN1Q7Z2K8 1008 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 TMPRSS6Q8IU80 811 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 GALNT15Q8N3T1 639 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 ZNF366Q8N895 744 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 SIPA1Q96FS4 1042 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 CEP295NLQ96MC4 621 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 CLIC6Q96NY7 704 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 FCRL3Q96P31 734 aaPredicted RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 KLF16Q9BXK1 252 aaPredicted RBP9.89□□□□□ -0.83
LINC01238-201ENST00000416204 ITM2CQ9NQX7 267 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 KRT82Q9NSB4 513 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 PCDHB13Q9Y5F0 798 aa9.89□□□□□ -0.83
LINC01238-201ENST00000416204 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 SLC26A4O43511 780 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 TNFSF14O43557 240 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 SYNCRIPO60506 623 aaKnown RBP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 FSBPO95073 299 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ZDHHC11BP0C7U3 371 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ZNF883P0CG24 379 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ACADMP11310 421 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 KRT10P13645 584 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 GAP43P17677 238 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 TNNI1P19237 187 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 CYP2J2P51589 502 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 MAP3K7CLP57077 242 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 DNAJC3Q13217 504 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 SF3A1Q15459 793 aaKnown RBP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 SMAD1Q15797 465 aaKnown RBP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 IL27RAQ6UWB1 636 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 HTR3DQ70Z44 454 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ACOT1Q86TX2 421 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 GATAD2AQ86YP4 633 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ZMIZ2Q8NF64 920 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 PRCCQ92733 491 aaPredicted RBP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 SMOQ99835 787 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 CIPCQ9C0C6 399 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 PRORYQ9H606 182 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 DMAP1Q9NPF5 467 aaPredicted RBP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC01238-201ENST00000416204 FAM49BQ9NUQ9 324 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 PANK4Q9NVE7 773 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 HSPBP1Q9NZL4 362 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 WDR35Q9P2L0 1181 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 CLEC4EQ9ULY5 219 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 ANKRD6Q9Y2G4 727 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 AK5Q9Y6K8 562 aa9.88□□□□□ -0.83
LINC01238-201ENST00000416204 HECTD1Q9ULT8 2610 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 A0A1W2PQH9 124 aa9.87□□□□□ -0.83
LINC01238-201ENST00000416204 CLIC2O15247 247 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms