RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MARK1Q9P0L2 795 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 NUDT5Q9UKK9 219 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
PDLIM2-208ENST00000416159 MDM4O15151 490 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 GDF9O60383 454 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 MPLP40238 635 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 LIMK1P53667 647 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 COG7P83436 770 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 CUL2Q13617 745 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 SF3A2Q15428 464 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 PIGZQ86VD9 579 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 TTC30AQ86WT1 665 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 TERB1Q8NA31 727 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 SLC35C1Q96A29 364 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 CEP63Q96MT8 703 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 BBS2Q9BXC9 721 aa18.49■□□□□ 0.55
PDLIM2-208ENST00000416159 NEDD8-MDP1E9PL57 170 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 CACNG3O60359 315 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 STC2O76061 302 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 TYRP14679 529 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 HNRNPLP14866 589 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 TBXAS1P24557 533 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 CCDC6Q16204 474 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 SGO2Q562F6 1265 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 C10orf76Q5T2E6 689 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 PMS2CLQ68D20 193 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 ISM2Q6H9L7 571 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 Q6ZNB5 142 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 TPGS1Q6ZTW0 290 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 ZNF513Q8N8E2 541 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 DCLK3Q9C098 648 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 DNAJC17Q9NVM6 304 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 INVSQ9Y283 1065 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 STARD13Q9Y3M8 1113 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 THADAQ6YHU6 1953 aa18.48■□□□□ 0.55
PDLIM2-208ENST00000416159 BCLAF3A2AJT9 711 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 PMM2O15305 246 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 ADAM23O75077 832 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 CREB5Q02930 508 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 BYSLQ13895 437 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 OLIG1Q8TAK6 271 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 BCCIPQ9P287 314 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 HESX1Q9UBX0 185 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 RASAL2Q9UJF2 1139 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 KIAA1257Q9ULG3 409 aa18.47■□□□□ 0.55
PDLIM2-208ENST00000416159 BICDL2A1A5D9 508 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 TRIM24O15164 1050 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 CAVIN2O95810 425 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 VDRP11473 427 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 CD19P15391 556 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 CD44P16070 742 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 CHKAP35790 457 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 FMO5P49326 533 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 TKTL1P51854 596 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 BCAT1P54687 386 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 YWHAGP61981 247 aaKnown RBP eCLIP18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 BST2Q10589 180 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 EFEMP1Q12805 493 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 LRMPQ12912 555 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 GOLGA7BQ2TAP0 167 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 CCDC40Q4G0X9 1142 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 IL31Q6EBC2 164 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 PM20D1Q6GTS8 502 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 FOXR2Q6PJQ5 311 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 SPACA7Q96KW9 195 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 ZDHHC4Q9NPG8 344 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 TSPAN16Q9UKR8 245 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 STRIP2Q9ULQ0 834 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 SPTBN2O15020 2390 aa18.46■□□□□ 0.55
PDLIM2-208ENST00000416159 TCRBV21S2A2A0A5A6 115 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 ZBED1O96006 694 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 NTSR1P30989 418 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 P2RY2P41231 377 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 PDE4CQ08493 712 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 CETN1Q12798 172 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 SDE2Q6IQ49 451 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 KLHL10Q6JEL2 608 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 RSRC2Q7L4I2 434 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 PGBD3Q8N328 593 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 UBR7Q8N806 425 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 NT5C1BQ96P26 610 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 SMOC1Q9H4F8 434 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 LRRC4Q9HBW1 653 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 MARCH2Q9P0N8 246 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 NUP205Q92621 2012 aa18.45■□□□□ 0.54
PDLIM2-208ENST00000416159 PPP1R3GB7ZBB8 358 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 P4HA2O15460 535 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 ZBTB24O43167 697 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 KLKB1P03952 638 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 HMBSP08397 361 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 CISD3P0C7P0 127 aa18.44■□□□□ 0.54
PDLIM2-208ENST00000416159 BCKDHBP21953 392 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms