RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ATG2BQ96BY7 2078 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 BICDL2A1A5D9 508 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 K7EQS6 105 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 SCAMP3O14828 347 aaKnown RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ZNF500O60304 480 aaPredicted RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 CLCN1P35523 988 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ANO4Q32M45 955 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 HSP90AA4PQ58FG1 418 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 EOGTQ5NDL2 527 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 APTXQ7Z2E3 356 aaKnown RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 TMC6Q7Z403 805 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ARHGAP18Q8N392 663 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 EZH1Q92800 747 aaPredicted RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ZC3H10Q96K80 434 aaKnown RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ZFRQ96KR1 1074 aaKnown RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 METTL14Q9HCE5 456 aaKnown RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 DEC1Q9P2X7 70 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 ARMCX3Q9UH62 379 aaPredicted RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 DNMT3LQ9UJW3 386 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 MMP17Q9ULZ9 603 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 DMXL1Q9Y485 3027 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 A0A1B0GTH6 734 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 HOXC11O43248 304 aaPredicted RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 IRF1P10914 325 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 HTR3DQ70Z44 454 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 VSTM4Q8IW00 320 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 KCNV2Q8TDN2 545 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 EEF2KMTQ96G04 330 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 TMEM176AQ96HP8 235 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 POLMQ9NP87 494 aaPredicted RBP21.53■■□□□ 1.04
PTPRU-203ENST00000415600 SPHK2Q9NRA0 654 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 CISHQ9NSE2 258 aa21.53■■□□□ 1.04
PTPRU-203ENST00000415600 TBC1D3BA6NDS4 549 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 CYP26A1O43174 497 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 EPN2O95208 641 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 PLA2G4AP47712 749 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 KIF11P52732 1056 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 CETN1Q12798 172 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 GAB4Q2WGN9 574 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 ZNF394Q53GI3 561 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 C10orf120Q5SQS8 335 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 TTI2Q6NXR4 508 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 KBTBD6Q86V97 674 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 BBS7Q8IWZ6 715 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 XPO6Q96QU8 1125 aaKnown RBP21.52■■□□□ 1.04
PTPRU-203ENST00000415600 WDR35Q9P2L0 1181 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 NAGPAQ9UK23 515 aa21.52■■□□□ 1.04
PTPRU-203ENST00000415600 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.52■■□□□ 1.04
PTPRU-203ENST00000415600 SPAG17Q6Q759 2223 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 A0A0A0MRY4 1105 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 TRIM49BA6NDI0 452 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 ZBTB24O43167 697 aaPredicted RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 RARGP13631 454 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 ATXN1P54253 815 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 PMS1P54277 932 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 BYSLQ13895 437 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 AASDHQ4L235 1098 aaPredicted RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 WHAMMQ8TF30 809 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 DDX1Q92499 740 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 CNOT6LQ96LI5 555 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 UBXN6Q9BZV1 441 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 ARRDC1-AS1Q9H2J1 176 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 THAP9Q9H5L6 903 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 CLIC5Q9NZA1 410 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 LIMA1Q9UHB6 759 aaKnown RBP21.51■■□□□ 1.03
PTPRU-203ENST00000415600 ZNF510Q9Y2H8 683 aa21.51■■□□□ 1.03
PTPRU-203ENST00000415600 HHLA1C9JL84 531 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 TBXAS1P24557 533 aaPredicted RBP21.5■■□□□ 1.03
PTPRU-203ENST00000415600 GBP1P32455 592 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 SLC6A11P48066 632 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 KDSRQ06136 332 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 NR1I3Q14994 352 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 CRY1Q16526 586 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 PPP1R26Q5T8A7 1209 aaPredicted RBP21.5■■□□□ 1.03
PTPRU-203ENST00000415600 ANKRD40Q6AI12 368 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 ANO7Q6IWH7 933 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 LRRC8AQ8IWT6 810 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 ZNF276Q8N554 614 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 CCDC33Q8N5R6 958 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 SEMA4DQ92854 862 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 SPACA7Q96KW9 195 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 KLF16Q9BXK1 252 aaPredicted RBP21.5■■□□□ 1.03
PTPRU-203ENST00000415600 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTPRU-203ENST00000415600 DCHS1Q96JQ0 3298 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 SDK1Q7Z5N4 2213 aa21.5■■□□□ 1.03
PTPRU-203ENST00000415600 A0A1W2PQH9 124 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 ZNF806P0C7X5 589 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 TIE1P35590 1138 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 PLK5Q496M5 336 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 ARHGAP17Q68EM7 881 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 FOXR2Q6PJQ5 311 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 GPRIN1Q7Z2K8 1008 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 ZC3H3Q8IXZ2 948 aaKnown RBP21.49■■□□□ 1.03
PTPRU-203ENST00000415600 ANKRD20A12PQ8NF67 263 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 CEP63Q96MT8 703 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 HESX1Q9UBX0 185 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 COQ4Q9Y3A0 265 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 RALGAPA1Q6GYQ0 2036 aa21.49■■□□□ 1.03
PTPRU-203ENST00000415600 LRRC10BA6NIK2 292 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms