RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 PAK1Q13153 545 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 USP39Q53GS9 565 aaKnown RBP26.24■■□□□ 1.79
HLA-C-204ENST00000415537 EOGTQ5NDL2 527 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 EMC10Q5UCC4 262 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 ANO7Q6IWH7 933 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 PRR23CQ6ZRP0 262 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 RSRC2Q7L4I2 434 aaKnown RBP26.24■■□□□ 1.79
HLA-C-204ENST00000415537 IL17RCQ8NAC3 791 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 ZC3H10Q96K80 434 aaKnown RBP26.24■■□□□ 1.79
HLA-C-204ENST00000415537 ARRDC1-AS1Q9H2J1 176 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 LRRC4Q9HBW1 653 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 KIAA1257Q9ULG3 409 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 ZNF510Q9Y2H8 683 aa26.24■■□□□ 1.79
HLA-C-204ENST00000415537 MYO18AQ92614 2054 aaKnown RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 XPO1O14980 1071 aaKnown RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 P4HA2O15460 535 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 KIR2DL1P43626 348 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 STX17P56962 302 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 YWHAGP61981 247 aaKnown RBP eCLIP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 PDE4CQ08493 712 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 BST2Q10589 180 aaKnown RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 EFEMP1Q12805 493 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 ELF2Q15723 593 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 TMEM270Q6UE05 265 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 PPM1KQ8N3J5 372 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 PHTF2Q8N3S3 785 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 TPSD1Q9BZJ3 242 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 POLMQ9NP87 494 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 DNAJC17Q9NVM6 304 aaKnown RBP26.23■■□□□ 1.79
HLA-C-204ENST00000415537 PCDHB4Q9Y5E5 795 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 SDK1Q7Z5N4 2213 aa26.23■■□□□ 1.79
HLA-C-204ENST00000415537 STC2O76061 302 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 RHOBTB1O94844 696 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 ZBED1O96006 694 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 TYRP14679 529 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 GBP1P32455 592 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 PLK5Q496M5 336 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 C10orf76Q5T2E6 689 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 GRAMD4Q6IC98 578 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 TMEM92Q6UXU6 159 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 TRMT11Q7Z4G4 463 aaKnown RBP26.22■■□□□ 1.79
HLA-C-204ENST00000415537 TERB1Q8NA31 727 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 KCNV2Q8TDN2 545 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 CNOT6LQ96LI5 555 aaKnown RBP26.22■■□□□ 1.79
HLA-C-204ENST00000415537 IPO9Q96P70 1041 aaKnown RBP26.22■■□□□ 1.79
HLA-C-204ENST00000415537 STRIP2Q9ULQ0 834 aa26.22■■□□□ 1.79
HLA-C-204ENST00000415537 SGK1O00141 431 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 DCLK1O15075 740 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 EPN2O95208 641 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 FGFR1OPO95684 399 aaKnown RBP26.21■■□□□ 1.79
HLA-C-204ENST00000415537 PAEPP09466 180 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 UBE2HP62256 183 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 Q6ZNB5 142 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 RASSF3Q86WH2 238 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 UBR7Q8N806 425 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 ZNF513Q8N8E2 541 aaPredicted RBP26.21■■□□□ 1.79
HLA-C-204ENST00000415537 TRIML1Q8N9V2 468 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 UBA3Q8TBC4 463 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 SRRTQ9BXP5 876 aaKnown RBP26.21■■□□□ 1.79
HLA-C-204ENST00000415537 ULBP1Q9BZM6 244 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 DCLK3Q9C098 648 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 MARK1Q9P0L2 795 aa26.21■■□□□ 1.79
HLA-C-204ENST00000415537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.2■■□□□ 1.78
HLA-C-204ENST00000415537 TULP2O00295 520 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 CACNG3O60359 315 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 HMBSP08397 361 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 KCNH2Q12809 1159 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 PM20D1Q6GTS8 502 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 C11orf74Q86VG3 221 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 SIX6OS1Q8N1H7 587 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 MDGA1Q8NFP4 955 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 NETO1Q8TDF5 533 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 RTKNQ9BST9 563 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 DUSP15Q9H1R2 295 aaPredicted RBP26.2■■□□□ 1.78
HLA-C-204ENST00000415537 ZDHHC4Q9NPG8 344 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 MARCH2Q9P0N8 246 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 BCCIPQ9P287 314 aaKnown RBP eCLIP26.2■■□□□ 1.78
HLA-C-204ENST00000415537 INVSQ9Y283 1065 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 PCDHGA5Q9Y5G8 931 aa26.2■■□□□ 1.78
HLA-C-204ENST00000415537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.2■■□□□ 1.78
HLA-C-204ENST00000415537 CEP250Q9BV73 2442 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 O00370 1275 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 SETSIPP0DME0 302 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 CORO1AP31146 461 aaKnown RBP26.19■■□□□ 1.78
HLA-C-204ENST00000415537 CHKAP35790 457 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 ATXN1P54253 815 aaKnown RBP26.19■■□□□ 1.78
HLA-C-204ENST00000415537 ADIGQ0VDE8 80 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 CAMK4Q16566 473 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 TRIM59Q8IWR1 403 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 C12orf50Q8NA57 414 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-204ENST00000415537 BHMTQ93088 406 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 OLA1Q9NTK5 396 aaKnown RBP26.19■■□□□ 1.78
HLA-C-204ENST00000415537 CHMP5Q9NZZ3 219 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 KIAA1468Q9P260 1216 aa26.19■■□□□ 1.78
HLA-C-204ENST00000415537 THADAQ6YHU6 1953 aa26.18■■□□□ 1.78
HLA-C-204ENST00000415537 SLC12A8A0AV02 714 aa26.18■■□□□ 1.78
HLA-C-204ENST00000415537 TRIM24O15164 1050 aa26.18■■□□□ 1.78
HLA-C-204ENST00000415537 AFPP02771 609 aaKnown RBP26.18■■□□□ 1.78
HLA-C-204ENST00000415537 DGKGP49619 791 aa26.18■■□□□ 1.78
HLA-C-204ENST00000415537 CCDC6Q16204 474 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms