RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TMEM175Q9BSA9 504 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 CRTAC1Q9NQ79 661 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 DDX56Q9NY93 547 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 NOP53Q9NZM5 478 aaKnown RBP12.06□□□□□ -0.48
RFFL-205ENST00000415395 SENP1Q9P0U3 644 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
RFFL-205ENST00000415395 DPYSL4O14531 572 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 SYN3O14994 580 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 FAM200BP0CF97 657 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 BRAFP15056 766 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 CCND1P24385 295 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 IGFBP6P24592 240 aaPredicted RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 TKTP29401 623 aaKnown RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 BRCC3P46736 316 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 ZNF143P52747 638 aaPredicted RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 CCL23P55773 120 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 OGDHQ02218 1023 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 CRYMQ14894 314 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 SETDB1Q15047 1291 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 CCNG2Q16589 344 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 LONRF1Q17RB8 773 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 MDH1BQ5I0G3 518 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 RNF43Q68DV7 783 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 OVOS1Q6IE37 1185 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 FAM171BQ6P995 826 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 TBC1D1Q86TI0 1168 aaPredicted RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 ZNF280BQ86YH2 543 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 EXD1Q8NHP7 514 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 JOSD2Q8TAC2 188 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 KLHL29Q96CT2 875 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 SCLYQ96I15 445 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 CFAP57Q96MR6 1250 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 ASNSD1Q9NWL6 643 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.05□□□□□ -0.48
RFFL-205ENST00000415395 BRCA2P51587 3418 aa12.05□□□□□ -0.48
RFFL-205ENST00000415395 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 C2CD4BA6NLJ0 364 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 WFS1O76024 890 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 RNF8O76064 485 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 UBOX5O94941 541 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 KRT7P08729 469 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 GPD1P21695 349 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 CYP2C18P33260 490 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 PCK1P35558 622 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 KCNJ1P48048 391 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 RGS7P49802 495 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 LBX1P52954 281 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 ITGA8P53708 1063 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 TSPY1Q01534 308 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 BNIP1Q12981 228 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 IKBKEQ14164 716 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 HADHQ16836 314 aaKnown RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 GALNTL6Q49A17 601 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 KIAA0319Q5VV43 1072 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 PAQR9Q6ZVX9 377 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 SLC26A9Q7LBE3 791 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 NECAB2Q7Z6G3 386 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 FAM35AQ86V20 835 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 CPNE8Q86YQ8 564 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 MGARPQ8TDB4 240 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 TGS1Q96RS0 853 aaKnown RBP12.04□□□□□ -0.48
RFFL-205ENST00000415395 RTP3Q9BQQ7 232 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 MED10Q9BTT4 135 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 EBF2Q9HAK2 575 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 FGFR1OP2Q9NVK5 253 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 DONSONQ9NYP3 566 aa12.04□□□□□ -0.48
RFFL-205ENST00000415395 TCRBV7S2A1N4TA0A589 114 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 F8VP50 259 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 EFCAB14O75071 495 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 FBXO21O94952 628 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ALADP13716 330 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 ALDH3A1P30838 453 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PTPN7P35236 360 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 OR1G1P47890 313 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 SLC18A1P54219 525 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 TAS2R40P59535 323 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 NCALDP61601 193 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 PPARDQ03181 441 aa12.03□□□□□ -0.48
RFFL-205ENST00000415395 YWHAHQ04917 246 aaPredicted RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
RFFL-205ENST00000415395 EFHC1Q5JVL4 640 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms