RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PGM1P36871 562 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SERPINB9P50453 376 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 FSTL1Q12841 308 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 SH3D19Q5HYK7 790 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 FAM102AQ5T9C2 384 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 TIFABQ6ZNK6 161 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 NET1Q7Z628 596 aaPredicted RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 GALNT15Q8N3T1 639 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PLD5Q8N7P1 536 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PDCD7Q8N8D1 485 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 RBM15BQ8NDT2 890 aaKnown RBP10.16□□□□□ -0.78
CD44-206ENST00000415148 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PANX3Q96QZ0 392 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 PEBP4Q96S96 227 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 TBCBQ99426 244 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 POPDC2Q9HBU9 364 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.16□□□□□ -0.78
CD44-206ENST00000415148 SIX4Q9UIU6 781 aa10.16□□□□□ -0.78
CD44-206ENST00000415148 ANK1P16157 1881 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 MEI4A8MW99 385 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 B2RBV5 119 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 DPYSL4O14531 572 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 APOL1O14791 398 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 KRT19P08727 400 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 PDGFRAP16234 1089 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 CRHR1P34998 444 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 RAP1GAPP47736 663 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 CDH8P55286 799 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 STILQ15468 1287 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 SLC9A4Q6AI14 798 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 ARCQ7LC44 396 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 CAND1Q86VP6 1230 aaKnown RBP10.15□□□□□ -0.78
CD44-206ENST00000415148 PPM1NQ8N819 430 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 AFG1LQ8WV93 481 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 NFKBIZQ9BYH8 718 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
CD44-206ENST00000415148 ELOVL4Q9GZR5 314 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 PLAC1Q9HBJ0 212 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 ETNK2Q9NVF9 386 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
CD44-206ENST00000415148 M0QYV0 167 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 KCNN4O15554 427 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 SNNO75324 88 aaPredicted RBP10.15□□□□□ -0.79
CD44-206ENST00000415148 IL4RP24394 825 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 MAGEA3P43357 314 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 SLC26A2P50443 739 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 TNFAIP2Q03169 654 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 KDSRQ06136 332 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 POU5F1BQ06416 359 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 ORC1Q13415 861 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 KRT81Q14533 505 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 KYAT1Q16773 422 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 DNAL1Q4LDG9 190 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 NOL9Q5SY16 702 aaKnown RBP10.15□□□□□ -0.79
CD44-206ENST00000415148 C6orf163Q5TEZ5 329 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 RNF111Q6ZNA4 994 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 RIOX2Q8IUF8 465 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 CRLF3Q8IUI8 442 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 EGFL6Q8IUX8 553 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 NUDCD3Q8IVD9 361 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 CTAGE3PQ8IX95 158 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 C1orf127Q8N9H9 656 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 RXFP2Q8WXD0 754 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 CFAP36Q96G28 342 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 HEXIM2Q96MH2 286 aaKnown RBP10.15□□□□□ -0.79
CD44-206ENST00000415148 ACAP3Q96P50 834 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 OCEL1Q9H607 264 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 ASB7Q9H672 318 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 IFT122Q9HBG6 1241 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 ETAA1Q9NY74 926 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 TAGLN3Q9UI15 199 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 ANGPTL2Q9UKU9 493 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 PLA2G4CQ9UP65 541 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.79
CD44-206ENST00000415148 SLC15A5A6NIM6 579 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 FAM159BA6NKW6 160 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 ZBTB42B2RXF5 422 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MAP3K7O43318 606 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TM7SF2O76062 418 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 STAU1O95793 577 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 ZBED1O96006 694 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 SPATA31D3P0C874 917 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 DESP17661 470 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TPSB2P20231 275 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 BCAR1P56945 870 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 TMPRSS15P98073 1019 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 ROR2Q01974 943 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 BST1Q10588 318 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 WASHC5Q12768 1159 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 BMPR2Q13873 1038 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
CD44-206ENST00000415148 TPSAB1Q15661 275 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 GSTA3Q16772 222 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 TEX44Q53QW1 395 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 LCLAT1Q6UWP7 414 aa10.14□□□□□ -0.79
CD44-206ENST00000415148 RIPOR1Q6ZS17 1223 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms