RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 HARS2P49590 506 aaKnown RBP15.31■□□□□ 0.04
LIMS1-206ENST00000414829 YWHAZP63104 245 aaKnown RBP15.31■□□□□ 0.04
LIMS1-206ENST00000414829 NOMO3P69849 1222 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 ARID5AQ03989 594 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 SARM1Q6SZW1 724 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 HTR3DQ70Z44 454 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 SLC26A9Q7LBE3 791 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 MIB1Q86YT6 1006 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 BAP1Q92560 729 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 LRRC3BQ96PB8 259 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 PRRX2Q99811 253 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 IER2Q9BTL4 223 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 DDX23Q9BUQ8 820 aaKnown RBP15.31■□□□□ 0.04
LIMS1-206ENST00000414829 TTYH3Q9C0H2 523 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 HEBP1Q9NRV9 189 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 AIPL1Q9NZN9 384 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 WNT6Q9Y6F9 365 aa15.31■□□□□ 0.04
LIMS1-206ENST00000414829 KRBA1A5PL33 1030 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 LRRC53A6NM62 1247 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-206ENST00000414829 TBX18O95935 607 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 IRF1P10914 325 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 CTHP32929 405 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 CHKAP35790 457 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 GABRB2P47870 512 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 ZBED6P86452 979 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 RING1Q06587 406 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 EML3Q32P44 896 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 PTPN20Q4JDL3 420 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 NUGGCQ68CJ6 796 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 ASTLQ6HA08 431 aaPredicted RBP15.3■□□□□ 0.04
LIMS1-206ENST00000414829 HFE2Q6ZVN8 426 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 UNC45BQ8IWX7 931 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 FLCNQ8NFG4 579 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 DOCK6Q96HP0 2047 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 ZFYVE19Q96K21 471 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 XPO4Q9C0E2 1151 aaKnown RBP15.3■□□□□ 0.04
LIMS1-206ENST00000414829 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
LIMS1-206ENST00000414829 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 CYTH4Q9UIA0 394 aa15.3■□□□□ 0.04
LIMS1-206ENST00000414829 LUC7L2Q9Y383 392 aaKnown RBP15.3■□□□□ 0.04
LIMS1-206ENST00000414829 SLC12A8A0AV02 714 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 FAM86C2PA6NEL3 165 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PIK3R2O00459 728 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 STC2O76061 302 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 CYP1A1P04798 512 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 CALB1P05937 261 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 DESP17661 470 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 EIF2DP41214 584 aaKnown RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PRKCIP41743 596 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PGFP49763 221 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 CDK17Q00537 523 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 FMO1Q01740 532 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 LRRC32Q14392 662 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 TRIP4Q15650 581 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 OLFML1Q6UWY5 402 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 WDTC1Q8N5D0 677 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PJA1Q8NG27 643 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 FAM3CQ92520 227 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 EDEM1Q92611 657 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 AGPAT1Q99943 283 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 IRX2Q9BZI1 471 aaPredicted RBP15.29■□□□□ 0.04
LIMS1-206ENST00000414829 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 STAP1Q9ULZ2 295 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 SIT1Q9Y3P8 196 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
LIMS1-206ENST00000414829 DAB1O75553 588 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 GABBR2O75899 941 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 ERBB2P04626 1255 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 SLC2A3P11169 496 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 AOC1P19801 751 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 MMP8P22894 467 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 CORO1AP31146 461 aaKnown RBP15.28■□□□□ 0.04
LIMS1-206ENST00000414829 GBP1P32455 592 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 SLC11A2P49281 568 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 ZXDBP98169 803 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 SLC6A3Q01959 620 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 CENPCQ03188 943 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 TNK2Q07912 1038 aa15.28■□□□□ 0.04
LIMS1-206ENST00000414829 GRSF1Q12849 480 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms