RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ITGAVP06756 1048 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 ABCB4P21439 1286 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 ILKQ13418 452 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 MAPRE1Q15691 268 aaKnown RBP16.73■□□□□ 0.27
CPNE1-208ENST00000414711 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 KIAA1614Q5VZ46 1190 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 ADALQ6DHV7 355 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 NT5DC4Q86YG4 428 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 EID2Q8N6I1 236 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 LRRC52Q8N7C0 313 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 RFFLQ8WZ73 363 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 WBP2Q969T9 261 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 CRTAC1Q9NQ79 661 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 MARK1Q9P0L2 795 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 WDR35Q9P2L0 1181 aa16.73■□□□□ 0.27
CPNE1-208ENST00000414711 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 NPHP3-ACAD11A0A0J9YXS1 232 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 REC8O95072 547 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 SCP2P22307 547 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 COPAP53621 1224 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 C21orf59P57076 290 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 TFAMQ00059 246 aaKnown RBP16.72■□□□□ 0.27
CPNE1-208ENST00000414711 SOWAHAQ2M3V2 549 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 ATG14Q6ZNE5 492 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 TPGS1Q6ZTW0 290 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 BIRC7Q96CA5 298 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 PCED1BQ96HM7 432 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 C8orf48Q96LL4 319 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 ELF4Q99607 663 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-208ENST00000414711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPNE1-208ENST00000414711 TM6SF1Q9BZW5 370 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 KCND2Q9NZV8 630 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 CDH9Q9ULB4 789 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
CPNE1-208ENST00000414711 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 TISP43B9A030 160 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 NPC1O15118 1278 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 IL18RAPO95256 599 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 CISD3P0C7P0 127 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 PLCG1P19174 1290 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 CD27P26842 260 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 ACSL1P33121 698 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 INSM1Q01101 510 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 POU5F1Q01860 360 aaKnown RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 ENPP2Q13822 863 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 HECTD3Q5T447 861 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 SAP25Q8TEE9 199 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 ACE2Q9BYF1 805 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
CPNE1-208ENST00000414711 THAP10Q9P2Z0 257 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 AGO2Q9UKV8 859 aaKnown RBP16.71■□□□□ 0.27
CPNE1-208ENST00000414711 BOD1L1Q8NFC6 3051 aa16.71■□□□□ 0.26
CPNE1-208ENST00000414711 ANKRD63C9JTQ0 380 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 FSBPO95073 299 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 SEMA4FO95754 770 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 MPOP05164 745 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 LMO2P25791 158 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 SHBQ15464 509 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
CPNE1-208ENST00000414711 PRAMEF14Q5SWL7 426 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 C4orf32Q8N8J7 132 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 SYT2Q8N9I0 419 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-208ENST00000414711 KBTBD7Q8WVZ9 684 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 OVCA2Q8WZ82 227 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 BHMTQ93088 406 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 FBXO32Q969P5 355 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
CPNE1-208ENST00000414711 DPH1Q9BZG8 443 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 NACA2Q9H009 215 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 PCDHB1Q9Y5F3 818 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 CKAP5Q14008 2032 aa16.7■□□□□ 0.26
CPNE1-208ENST00000414711 K7ENP7 123 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-208ENST00000414711 VILLO15195 856 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 YKT6O15498 198 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 TSPAN3O60637 253 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 DXOO77932 396 aaKnown RBP16.69■□□□□ 0.26
CPNE1-208ENST00000414711 YWHAQP27348 245 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 TUBP50607 506 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 BCAT1P54687 386 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 CDH8P55286 799 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 WNT7BP56706 349 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 GABREP78334 506 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 SCARA3Q6AZY7 606 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 INO80CQ6PI98 192 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-208ENST00000414711 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-208ENST00000414711 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 MYCBPAPQ8TBZ2 947 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■■ 62.4
CPNE1-208ENST00000414711 TMEM30AQ9NV96 361 aa16.69■□□□□ 0.26
CPNE1-208ENST00000414711 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms