RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 MAELQ96JY0 434 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 ALS2CR12Q96Q35 445 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 TCF25Q9BQ70 676 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 ISCA1Q9BUE6 129 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 PHF20Q9BVI0 1012 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 TXLNGYQ9BZA5 131 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 KRT23Q9C075 422 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 B3GNT4Q9C0J1 378 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 NIF3L1Q9GZT8 377 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 KIAA1683Q9H0B3 1180 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 STN1Q9H668 368 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 HAUS4Q9H6D7 363 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 PIDD1Q9HB75 910 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 FANCEQ9HB96 536 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 MRPL40Q9NQ50 206 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 A1CFQ9NQ94 594 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 CCDC177Q9NQR7 707 aaPredicted RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 SDHAF3Q9NRP4 125 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 IARS2Q9NSE4 1012 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 C1orf112Q9NSG2 853 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 NSMCE4AQ9NXX6 385 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 HSPBP1Q9NZL4 362 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 HMG20BQ9P0W2 317 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 THEGQ9P2T0 379 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 CDC23Q9UJX2 597 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 RPS6KA6Q9UK32 745 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 CPSF3Q9UKF6 684 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 ANGPTL2Q9UKU9 493 aa4.14□□□□□ -1.75
LINC01048-201ENST00000414480 DDX60LQ5H9U9 1706 aaKnown RBP4.14□□□□□ -1.75
LINC01048-201ENST00000414480 CACNA1GO43497 2377 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 C15orf38-AP3S2A0A0A6YYH1 394 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 A0A0B4J269 797 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SH3D21A4FU49 640 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 RGSL1A5PLK6 1076 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ZNF503-AS2A6NEH8 195 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 A6NLC8 198 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 GPR89AB7ZAQ6 455 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 F6X3S4 739 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SPECC1L-ADORA2AF8WAN1 911 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 IFIT3O14879 490 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 AREL1O15033 823 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 HDAC3O15379 428 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 TMPRSS2O15393 492 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ASAP2O43150 1006 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 FRS3O43559 492 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 KRT86O43790 486 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 MAFKO60675 156 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SRGAP2O75044 1071 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CRTAPO75718 401 aaPredicted RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 KLHL2O95198 593 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 POP4O95707 220 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 OPN1MWP04001 364 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 POLR2MP0CAP2 368 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 GPR89BP0CG08 455 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 OPN1MW2P0DN77 364 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 OPN1MW3P0DN78 364 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 MYL4P12829 197 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 HDCP19113 662 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ALDH3A1P30838 453 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 PPARGP37231 505 aaPredicted RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 MSH2P43246 934 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 GCLCP48506 637 aaPredicted RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 HNMTP50135 292 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 GPC3P51654 580 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CASP5P51878 434 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ARHGDIBP52566 201 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ARFIP1P53367 373 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 HADHBP55084 474 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 FCGRTP55899 365 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 NOP14P78316 857 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 OTUD4Q01804 1114 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CEBPZQ03701 1054 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 PLD1Q13393 1074 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 GALNT3Q14435 633 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SQLEQ14534 574 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SSPNQ14714 243 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 EFTUD2Q15029 972 aaKnown RBP eCLIP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 RAB3GAP1Q15042 981 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 DDR2Q16832 855 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 TRIM71Q2Q1W2 868 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 ALG11Q2TAA5 492 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 FSCBQ5H9T9 825 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 RPS26P11Q5JNZ5 115 aaPredicted RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 TCTE1Q5JU00 501 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 IFIT1BQ5T764 474 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 FBXW10Q5XX13 1052 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CWF19L1Q69YN2 538 aaKnown RBP4.13□□□□□ -1.75
LINC01048-201ENST00000414480 BORAQ6PGQ7 559 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 AGMOQ6ZNB7 445 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 LCNL1Q6ZST4 164 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 LHFPL2Q6ZUX7 228 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 RHOUQ7L0Q8 258 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 NLRC3Q7RTR2 1065 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 RNF180Q86T96 592 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 OSTM1Q86WC4 334 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CD302Q8IX05 232 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 SYNPOQ8N3V7 929 aa4.13□□□□□ -1.75
LINC01048-201ENST00000414480 CERS5Q8N5B7 392 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms