RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NUDT3O95989 172 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 FPR3P25089 353 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 PBX1P40424 430 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 INHBEP58166 350 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 LMAN2Q12907 356 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 GRM1Q13255 1194 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 DNASE1L3Q13609 305 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 FAM83BQ5T0W9 1011 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 C10orf62Q5T681 223 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 GRHL2Q6ISB3 625 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 TRIM72Q6ZMU5 477 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 RASGRP3Q8IV61 690 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 VPS37AQ8NEZ2 397 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 NELL1Q92832 810 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 GRAMD1AQ96CP6 724 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 DAZAP1Q96EP5 407 aaKnown RBP4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 EDC3Q96F86 508 aaKnown RBP4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 ARPC5LQ9BPX5 153 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 CIPCQ9C0C6 399 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 TP63Q9H3D4 680 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 R3HDMLQ9H3Y0 253 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 SLITRK6Q9H5Y7 841 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 SERGEFQ9UGK8 458 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 LGALS16A8MUM7 142 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 H3BNC9 293 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 PDE8BO95263 885 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 SRGAP2BP0DMP2 458 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 APEHP13798 732 aaKnown RBP4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 PTH2RP49190 550 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 CFHR3Q02985 330 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 FOXO1Q12778 655 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 BLMHQ13867 455 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 TMEM196Q5HYL7 178 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 FBXO42Q6P3S6 717 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 NAPRTQ6XQN6 538 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 BCDIN3DQ7Z5W3 292 aaKnown RBP4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 AMIGO2Q86SJ2 522 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 ARHGEF25Q86VW2 580 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 ADGRG3Q86Y34 549 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 C12orf76Q8N812 135 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 RSC1A1Q92681 617 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 ZG16BQ96DA0 208 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 KAZALD1Q96I82 304 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 MMS19Q96T76 1030 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 MACROD1Q9BQ69 325 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 PAAF1Q9BRP4 392 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 ASAP1Q9ULH1 1129 aa4.44□□□□□ -1.7
HMGB1P11-201ENST00000413899 TCRBV5S1A1TA0A578 114 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 LRRC3CA6NJW4 275 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 AQP12BA6NM10 295 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 BTBD19C9JJ37 291 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 J3KTA2 159 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 IFRD1O00458 451 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 SUV39H1O43463 412 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 ASNA1O43681 348 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 MT-CO3P00414 261 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 ANXA6P08133 673 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 SERPINF1P36955 418 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 ALDH18A1P54886 795 aaKnown RBP4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 POLE2P56282 527 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 GPC5P78333 572 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 TXNL4AP83876 142 aaKnown RBP4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 SMN1Q16637 294 aaKnown RBP4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 FCRLBQ6BAA4 426 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 PIK3AP1Q6ZUJ8 805 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 TTC30AQ86WT1 665 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 GATAD2AQ86YP4 633 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 NRSN1Q8IZ57 195 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 CACNA2D3Q8IZS8 1091 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 STYXQ8WUJ0 223 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 RMDN3Q96TC7 470 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 KATNAL1Q9BW62 490 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 FSCN3Q9NQT6 498 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 VPS45Q9NRW7 570 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 ASIC5Q9NY37 505 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 TFCP2L1Q9NZI6 479 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 SEMA5BQ9P283 1151 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 LPAR3Q9UBY5 353 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 FZD4Q9ULV1 537 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 AOX1Q06278 1338 aa4.43□□□□□ -1.7
HMGB1P11-201ENST00000413899 PNMA6EA0A0J9YXQ4 647 aa4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 CTIFO43310 598 aaKnown RBP4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 TAF5LO75529 589 aa4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 CHRM5P08912 532 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 TMIGD3P0DMS9 266 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 ZNF37AP17032 561 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 MMP8P22894 467 aa4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 GSTM5P46439 218 aa4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 RENBPP51606 427 aa4.42□□□□□ -1.7
HMGB1P11-201ENST00000413899 TFF2Q03403 129 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms