RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 BHMTQ93088 406 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 ZNF560Q96MR9 790 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 GBP5Q96PP8 586 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.24
LITAF-203ENST00000413364 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.24
LITAF-203ENST00000413364 RNF39Q9H2S5 420 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.24
LITAF-203ENST00000413364 FAM49BQ9NUQ9 324 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 RNF19AQ9NV58 838 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 USP18Q9UMW8 372 aa13.52□□□□□ -0.24
LITAF-203ENST00000413364 TLDC2A0PJX2 215 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 RGS16O15492 202 aaPredicted RBP13.52□□□□□ -0.25
LITAF-203ENST00000413364 KPNA6O60684 536 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 DUSP11O75319 330 aaKnown RBP13.52□□□□□ -0.25
LITAF-203ENST00000413364 TTC4O95801 387 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 PDGFRAP16234 1089 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 PNPLA4P41247 253 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 RGS7P49802 495 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 HDAC4P56524 1084 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 USP46P62068 366 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 P3H1Q32P28 736 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 PMF1Q6P1K2 205 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 RELL1Q8IUW5 271 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 KCTD6Q8NC69 237 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 LSM14AQ8ND56 463 aaKnown RBP13.52□□□□□ -0.25
LITAF-203ENST00000413364 STK32AQ8WU08 396 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 SLC35F5Q8WV83 523 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 HESX1Q9UBX0 185 aa13.52□□□□□ -0.25
LITAF-203ENST00000413364 PIK3R2O00459 728 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 DPYSL4O14531 572 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 DNALI1O14645 258 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 RASGRF2O14827 1237 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 CST8O60676 142 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 AGTP01019 485 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 CALB2P22676 271 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ARSEP51690 589 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 SNX16P57768 344 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 CRHR2Q13324 411 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 MFSD5Q6N075 450 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 TAF2Q6P1X5 1199 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 EXOC3L1Q86VI1 746 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ZCCHC9Q8N567 271 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 EPS8L3Q8TE67 593 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 IRGQQ8WZA9 623 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 PIWIL1Q96J94 861 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 HAPLN3Q96S86 360 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ADAM7Q9H2U9 754 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 IPPQ9Y573 584 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 PDCD11Q14690 1871 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 SMIM23A6NLE4 172 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 A8MXQ7 604 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 SPTLC1O15269 473 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ACSL3O95573 720 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 HNRNPCP07910 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
LITAF-203ENST00000413364 CD48P09326 243 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 DYNLT1P63172 113 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 KCNJ2P63252 427 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 TAF5Q15542 800 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 CYP4V2Q6ZWL3 525 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 LIMS2Q7Z4I7 341 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 SMG8Q8ND04 991 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 ACTL9Q8TC94 416 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 HSPH1Q92598 858 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 KLHL29Q96CT2 875 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 HIC2Q96JB3 615 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 PWWP2AQ96N64 755 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 DPEP3Q9H4B8 488 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 PCDH9Q9HC56 1237 aa13.51□□□□□ -0.25
LITAF-203ENST00000413364 DNAJC17Q9NVM6 304 aaKnown RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
LITAF-203ENST00000413364 NDC80O14777 642 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 BIRC5O15392 142 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 FGFR1P11362 822 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 ETS1P14921 441 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 CTGFP29279 349 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 MLH1P40692 756 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 TAF6P49848 677 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
LITAF-203ENST00000413364 GPS1Q13098 491 aa13.5□□□□□ -0.25
LITAF-203ENST00000413364 LSAMPQ13449 338 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms