RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 CYP4F8P98187 520 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 CDO1Q16878 200 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 PDZD8Q8NEN9 1154 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 FNIP1Q8TF40 1166 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 NT5C3BQ969T7 300 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 NPY6RQ99463 290 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 CLDND1Q9NY35 253 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 IP6K2Q9UHH9 426 aa27.1■■□□□ 1.93
RHBDD3-203ENST00000413137 C2orf78A6NCI8 922 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 PROSCO94903 275 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 TCF4P15884 667 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 LTBRP36941 435 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 STXBP5Q5T5C0 1151 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 GPR153Q6NV75 609 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 EP400NLQ6ZTU2 488 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 BEND5Q7L4P6 421 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 DAAM2Q86T65 1068 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 DEFB123Q8N688 67 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 CMASQ8NFW8 434 aaPredicted RBP27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 DQX1Q8TE96 717 aaKnown RBP27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 CNPY3Q9BT09 278 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 SFMBT1Q9UHJ3 866 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 PSEN1P49768 467 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 SULT1E1P49888 294 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 COL19A1Q14993 1142 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 SLC25A52Q3SY17 297 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 TXNDC8Q6A555 127 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 TAC4Q86UU9 113 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 SHKBP1Q8TBC3 707 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 ATXN3LQ9H3M9 355 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 PIDD1Q9HB75 910 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 USTQ9Y2C2 406 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 ALG6Q9Y672 507 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 NOTCH4Q99466 2003 aa27.09■■□□□ 1.93
RHBDD3-203ENST00000413137 SYNJ2BP-COX16A0A087WUM0 186 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 TLR5O60602 858 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 PTPN9P43378 593 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 PABPC1LQ4VXU2 614 aaKnown RBP27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 PRSS36Q5K4E3 855 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 ZNF569Q5MCW4 686 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 POTEHQ6S545 545 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 SLFN11Q7Z7L1 901 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 RNF139Q8WU17 664 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 FAM172AQ8WUF8 416 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 CENPIQ92674 756 aaPredicted RBP27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 SLC22A12Q96S37 553 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 RNF38Q9H0F5 515 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 COX16Q9P0S2 106 aa27.08■■□□□ 1.93
RHBDD3-203ENST00000413137 MSI1O43347 362 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 COCHO43405 550 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 FTCDO95954 541 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 RALAP11233 206 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 COMTP21964 271 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 MSNP26038 577 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 PPP3CCP48454 512 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 HDAC4P56524 1084 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 CCDC85BQ15834 202 aaPredicted RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 IFI16Q16666 785 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 C10orf120Q5SQS8 335 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 C11orf63Q6NUN7 778 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 PDZD4Q76G19 769 aaPredicted RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 RSRC2Q7L4I2 434 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 BNIPLQ7Z465 357 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 NIPA2Q8N8Q9 360 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 CYP2S1Q96SQ9 504 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 S1PR5Q9H228 398 aa27.07■■□□□ 1.92
RHBDD3-203ENST00000413137 M0QYT0 321 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 KIF5CO60282 957 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 TRUB2O95900 331 aaKnown RBP27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 OAS1P00973 400 aaKnown RBP27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 SRGAP2BP0DMP2 458 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 EFEMP1Q12805 493 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 PIGHQ14442 188 aaPredicted RBP27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 HECTD3Q5T447 861 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 NYAP1Q6ZVC0 841 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 GPR149Q86SP6 731 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 SLC35F6Q8N357 371 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 WDR24Q96S15 920 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 TRIM62Q9BVG3 475 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 TRPC7Q9HCX4 862 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 STAP1Q9ULZ2 295 aa27.06■■□□□ 1.92
RHBDD3-203ENST00000413137 FANCGO15287 622 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 LRCH4O75427 683 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 IGLV3-25P01717 112 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 CDC25CP30307 473 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 NME3Q13232 169 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 TEAD2Q15562 447 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 MSANTD2Q6P1R3 559 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 ITFG1Q8TB96 612 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 SMOC2Q9H3U7 446 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 PIGVQ9NUD9 493 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 DDIT4Q9NX09 232 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 PACSIN2Q9UNF0 486 aaPredicted RBP27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 BRWD1Q9NSI6 2320 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 ESPNB1AK53 854 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 TAS2R40P59535 323 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 GNG11P61952 73 aa27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 EIF4EBP2Q13542 120 aaPredicted RBP27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 CC2D1AQ6P1N0 951 aaPredicted RBP27.05■■□□□ 1.92
RHBDD3-203ENST00000413137 NT5DC3Q86UY8 548 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms