RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ATG7O95352 703 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 NFICP08651 508 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 MYBL2P10244 700 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CLK3P49761 638 aaKnown RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 STRA8Q7Z7C7 330 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SLC26A11Q86WA9 606 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ZFP28Q8NHY6 868 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 NSMCE2Q96MF7 247 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM79Q9BSE2 394 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SNX13Q9Y5W8 968 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 H3BNX3 289 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 QSOX1O00391 747 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PPIBP23284 216 aaKnown RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CBX5P45973 191 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 HUNKP57058 714 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 OSTNP61366 133 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 NFYCQ13952 458 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CRELD2Q6UXH1 353 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ENGASEQ8NFI3 743 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 GJD4Q96KN9 370 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 C1QTNF1Q9BXJ1 281 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM49AQ9H0Q0 323 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SQORQ9Y6N5 450 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 HAT1O14929 419 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 UBDO15205 165 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 CSPG5O95196 566 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 FAM200BP0CF97 657 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 ADORA2BP29275 332 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 YWHABP31946 246 aaKnown RBP7.59□□□□□ -1.2
PTPN3-203ENST00000412145 FRG1Q14331 258 aaKnown RBP7.59□□□□□ -1.2
PTPN3-203ENST00000412145 DGKKQ5KSL6 1271 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 PRR23CQ6ZRP0 262 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 PTF1AQ7RTS3 328 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 HERC6Q8IVU3 1022 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 POMGNT2Q8NAT1 580 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.59□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF398Q8TD17 642 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 C6orf62Q9GZU0 229 aaPredicted RBP7.59□□□□□ -1.2
PTPN3-203ENST00000412145 NUAK2Q9H093 628 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 NMRAL1Q9HBL8 299 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 SPON1Q9HCB6 807 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 RNF181Q9P0P0 153 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 SCAF8Q9UPN6 1271 aaKnown RBP7.59□□□□□ -1.2
PTPN3-203ENST00000412145 PNPLA7Q6ZV29 1317 aa7.59□□□□□ -1.2
PTPN3-203ENST00000412145 LRRC14BA6NHZ5 514 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 IFRD1O00458 451 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 HS6ST1O60243 411 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 FEN1P39748 380 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PIK3CBP42338 1070 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 CDH4P55283 916 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 SLC34A1Q06495 639 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MAPK7Q13164 816 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 FAM187BQ17R55 369 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C5orf22Q49AR2 442 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 DHFR2Q86XF0 187 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TRPV1Q8NER1 839 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C12orf66Q96MD2 445 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 SPATA33Q96N06 139 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 RAPGEFL1Q9UHV5 662 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C19orf81C9J6K1 198 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ECE2O60344 883 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TFDP3Q5H9I0 405 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 KYAT3Q6YP21 454 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 STOX1Q6ZVD7 989 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PEX5LQ8IYB4 626 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C15orf40Q8WUR7 153 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 THAP1Q9NVV9 213 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 STOX2Q9P2F5 926 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 POLR1DQ9Y2S0 133 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 SYNDIG1LA6NDD5 238 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 UBTFL6P0CB48 400 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 IRAK1P51617 712 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 BROXQ5VW32 411 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TYW3Q6IPR3 259 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 BTN2A1Q7KYR7 527 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ZDHHC13Q8IUH4 622 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 CHPFQ8IZ52 775 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 C1orf54Q8WWF1 131 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM49BA6NDI0 452 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM49D1C9J1S8 452 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ATP6V1B1P15313 513 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ACAT1P24752 427 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 MLH1P40692 756 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 GCLCP48506 637 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 CHN2P52757 468 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NCOA4Q13772 614 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 LRRC14Q15048 493 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 TCHHL1Q5QJ38 904 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 NOTUMQ6P988 496 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 SMIM5Q71RC9 77 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 YTHDF3Q7Z739 585 aaKnown RBP7.58□□□□□ -1.2
PTPN3-203ENST00000412145 IFNEQ86WN2 208 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 GPALPP1Q8IXQ4 340 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 FAR1Q8WVX9 515 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 ATL1Q8WXF7 558 aa7.58□□□□□ -1.2
PTPN3-203ENST00000412145 EDC3Q96F86 508 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms