RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MGEA5O60502 916 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 GHRP10912 638 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 NDUFV1P49821 464 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 MAP3K7CLP57077 242 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 YWHAZP63104 245 aaKnown RBP25.5■■□□□ 1.67
VRK2-202ENST00000412104 BBS9Q3SYG4 887 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 DCAF6Q58WW2 860 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 PAXIP1Q6ZW49 1069 aaPredicted RBP25.5■■□□□ 1.67
VRK2-202ENST00000412104 FAM131BQ86XD5 332 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 FBXO36Q8NEA4 188 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 MGARPQ8TDB4 240 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 CSPG4P5Q96PW8 444 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 PAAF1Q9BRP4 392 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 GGA2Q9UJY4 613 aa25.5■■□□□ 1.67
VRK2-202ENST00000412104 RASA4BC9J798 803 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 CHADO15335 359 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 RASA4O43374 803 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 PRKAR2AP13861 404 aaKnown RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 ZFXP17010 805 aaPredicted RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 MTM1Q13496 603 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 LRRC14Q15048 493 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 FAM182AQ5T1J6 154 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 CCSAPQ6IQ19 270 aaPredicted RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 PPCSQ9HAB8 311 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 FZD10Q9ULW2 581 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 TSC2P49815 1807 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 ALDH1A1P00352 501 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 SSTR1P30872 391 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 RPL9P32969 192 aaKnown RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 PHBP35232 272 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 PITX1P78337 314 aaPredicted RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 GBE1Q04446 702 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 NR1H3Q13133 447 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 MPP2Q14168 576 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 UPP1Q16831 310 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 FAM35AQ86V20 835 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 CDKL3Q8IVW4 592 aaPredicted RBP25.49■■□□□ 1.67
VRK2-202ENST00000412104 ANKRD42Q8N9B4 389 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 LRRN4Q8WUT4 740 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 SEC16BQ96JE7 1060 aa25.49■■□□□ 1.67
VRK2-202ENST00000412104 NOS2P35228 1153 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 RAB27AP51159 221 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 TKTL1P51854 596 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 EFHC2Q5JST6 749 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 BNIPLQ7Z465 357 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 TRABD2AQ86V40 505 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 PYROXD2Q8N2H3 581 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 RNF169Q8NCN4 708 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 DYDC1Q8WWB3 177 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 NT5C3BQ969T7 300 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 PCED1BQ96HM7 432 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 SLC2A13Q96QE2 648 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 RAB6BQ9NRW1 208 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 SLC24A2Q9UI40 661 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 RABGEF1Q9UJ41 708 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 USP3Q9Y6I4 520 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 DNAH12Q6ZR08 3092 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 THSD7BQ9C0I4 1608 aa25.48■■□□□ 1.67
VRK2-202ENST00000412104 MYBPHLA2RUH7 354 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 ZNF623O75123 536 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 ELNP15502 786 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 CST5P28325 142 aaPredicted RBP25.47■■□□□ 1.67
VRK2-202ENST00000412104 SLC10A2Q12908 348 aaPredicted RBP25.47■■□□□ 1.67
VRK2-202ENST00000412104 SYCP2LQ5T4T6 812 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 GKAP1Q5VSY0 366 aaPredicted RBP25.47■■□□□ 1.67
VRK2-202ENST00000412104 LRRC34Q8IZ02 419 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 NPY6RQ99463 290 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 SMOQ99835 787 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 STAP1Q9ULZ2 295 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 AP1G2O75843 785 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 GOT1P17174 413 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 NR2C2P49116 596 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 RABGGTBP53611 331 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 XRCC4Q13426 336 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 DSC3Q14574 896 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 LPIN1Q14693 890 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 TIGD5Q53EQ6 642 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 NCBP2-AS2Q69YL0 99 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 PPP1R21Q6ZMI0 780 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 HFE2Q6ZVN8 426 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 HHIPL1Q96JK4 782 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 PSMC3IPQ9P2W1 217 aaPredicted RBP25.47■■□□□ 1.67
VRK2-202ENST00000412104 CDH9Q9ULB4 789 aa25.47■■□□□ 1.67
VRK2-202ENST00000412104 TDRD15B5MCY1 1934 aaKnown RBP25.47■■□□□ 1.67
VRK2-202ENST00000412104 TMEM88BA6NKF7 163 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 IBSPP21815 317 aaPredicted RBP25.46■■□□□ 1.67
VRK2-202ENST00000412104 GEMIN4P57678 1058 aaKnown RBP25.46■■□□□ 1.67
VRK2-202ENST00000412104 EFTUD2Q15029 972 aaKnown RBP eCLIP25.46■■□□□ 1.679e-7■■■■■ 40
VRK2-202ENST00000412104 RASA2Q15283 850 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 SLC45A4Q5BKX6 768 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 C6orf89Q6UWU4 347 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 C3orf62Q6ZUJ4 267 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 PSTKQ8IV42 348 aaKnown RBP25.46■■□□□ 1.67
VRK2-202ENST00000412104 PALM2Q8IXS6 379 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 CACNA2D3Q8IZS8 1091 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 ULBP1Q9BZM6 244 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 POPDC2Q9HBU9 364 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 MLXIPLQ9NP71 852 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 FETUBQ9UGM5 382 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms