RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MARCH2Q9P0N8 246 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 NUDT5Q9UKK9 219 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 MYO6Q9UM54 1294 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 ZNF510Q9Y2H8 683 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 YJEFN3A6XGL0 299 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 E7ENQ6 273 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 CAPN9O14815 690 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 MDM4O15151 490 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 ADH1CP00326 375 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 ARSAP15289 507 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 FERP16591 822 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 CDH5P33151 784 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 VCPP55072 806 aaKnown RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 LRRC32Q14392 662 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 NR1I3Q14994 352 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 IER5LQ5T953 404 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 HTR3DQ70Z44 454 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 ZDHHC17Q8IUH5 632 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 TTC8Q8TAM2 541 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 NDRG1Q92597 394 aaKnown RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 IQCDQ96DY2 449 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 NAP1L5Q96NT1 182 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 IER2Q9BTL4 223 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 NUP58Q9BVL2 599 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 FOXQ1Q9C009 403 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 KCNH6Q9H252 994 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
CHMP3-205ENST00000409810 NDRG2Q9UN36 371 aaKnown RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 HBS1LQ9Y450 684 aaKnown RBP11.41□□□□□ -0.58
CHMP3-205ENST00000409810 ATG2BQ96BY7 2078 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 KIAA1549LQ6ZVL6 1849 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 FAM170BA6NMN3 283 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 PAPSS1O43252 624 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CBFA2T2O43439 604 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 GLI1P08151 1106 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 MMEP08473 750 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 NCAM1P13591 858 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CD72P21854 359 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 TARSP26639 723 aaKnown RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 SOX9P48436 509 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 ZNF445P59923 1031 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CDR2Q01850 454 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 DHCR24Q15392 516 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 EFHC1Q5JVL4 640 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 MSANTD2Q6P1R3 559 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 BEND5Q7L4P6 421 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 NOP9Q86U38 636 aaKnown RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 BBS7Q8IWZ6 715 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CCDC105Q8IYK2 499 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 TMEM105Q8N8V8 129 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CLEC4CQ8WTT0 213 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 DDX1Q92499 740 aaKnown RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 EDEM1Q92611 657 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 SERPINB11Q96P15 392 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CPXM1Q96SM3 734 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 EDEM3Q9BZQ6 932 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 POPDC2Q9HBU9 364 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 CYTH4Q9UIA0 394 aa11.4□□□□□ -0.58
CHMP3-205ENST00000409810 NOCTQ9UK39 431 aaKnown RBP11.4□□□□□ -0.58
CHMP3-205ENST00000409810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 SCAMP3O14828 347 aaKnown RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 HSF2BPO75031 334 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 GABBR2O75899 941 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 STC2O76061 302 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 CYP17A1P05093 508 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 HMBSP08397 361 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 ADH5P11766 374 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 CORO1AP31146 461 aaKnown RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 GJA4P35212 333 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 CHKAP35790 457 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 RPS9P46781 194 aaKnown RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 ARID5AQ03989 594 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 GAD2Q05329 585 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 NNTQ13423 1086 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 PON2Q15165 354 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 PTPN20Q4JDL3 420 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 FIGNQ5HY92 759 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 DGKKQ5KSL6 1271 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 OR6B2Q6IFH4 312 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 WDTC1Q8N5D0 677 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 ZNF397Q8NF99 534 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 CD101Q93033 1021 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 C18orf8Q96DM3 657 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 LINC00597Q9H2U6 94 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 SEPT11Q9NVA2 429 aaKnown RBP11.39□□□□□ -0.59
CHMP3-205ENST00000409810 IFNKQ9P0W0 207 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
CHMP3-205ENST00000409810 CACNA1IQ9P0X4 2223 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms