RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 SREBF1P36956 1147 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 NOVP48745 357 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 SUMO3P55854 103 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 ANTXR2P58335 489 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 IRX6P78412 446 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 TFAP4Q01664 338 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 KLRC3Q07444 240 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 CACNB2Q08289 660 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 TTC22Q5TAA0 569 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 MFSD14CQ5VZR4 134 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 UBE2Q1Q7Z7E8 422 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 USP13Q92995 863 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 TRIM43Q96BQ3 446 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 SLF1Q9BQI6 1058 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 PDCD2LQ9BRP1 358 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 TEX13BQ9BXU2 312 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 UNC45AQ9H3U1 944 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 RNF41Q9H4P4 317 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 FBXO28Q9NVF7 368 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
LSM5-203ENST00000409782 COL20A1Q9P218 1284 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 CLIP2Q9UDT6 1046 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 TRPS1Q9UHF7 1281 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 CEP83Q9Y592 693 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 KCTD3Q9Y597 815 aa6.9□□□□□ -1.3
LSM5-203ENST00000409782 A0A0G2JNJ9 132 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 J3KRW8 73 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 STRNO43815 780 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 NUAK1O60285 661 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 PRAMEF4O60810 478 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 AMY1AP04745 511 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ANXA2P07355 339 aaKnown RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 ADORA2AP29274 412 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 MAPK9P45984 424 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 OAZ1P54368 228 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 CTXN1P60606 82 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 GALNT1Q10472 559 aaPredicted RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 FAM47AQ5JRC9 791 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 SLFN13Q68D06 897 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ABHD15Q6UXT9 468 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 TMC5Q6UXY8 1006 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 IGDCC3Q8IVU1 814 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 LRRC56Q8IYG6 542 aaPredicted RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 COLGALT2Q8IYK4 626 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ZNF566Q969W8 418 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 IQCDQ96DY2 449 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 DEFB118Q96PH6 123 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 VRK1Q99986 396 aaPredicted RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 HTATIP2Q9BUP3 242 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ADAM7Q9H2U9 754 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 MRPL46Q9H2W6 279 aaKnown RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 TMEM8AQ9HCN3 771 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 RASSF1Q9NS23 344 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 CPNE7Q9UBL6 633 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 Q9UFV3 132 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ZFP69BQ9UJL9 534 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 ZDHHC8Q9ULC8 765 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 STX8Q9UNK0 236 aa6.89□□□□□ -1.31
LSM5-203ENST00000409782 MKI67P46013 3256 aaKnown RBP6.89□□□□□ -1.31
LSM5-203ENST00000409782 COL11A1P12107 1806 aaPredicted RBP6.88□□□□□ -1.31
LSM5-203ENST00000409782 TEX33O43247 280 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 RANBP6O60518 1105 aaKnown RBP6.88□□□□□ -1.31
LSM5-203ENST00000409782 GPR32O75388 356 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 AGR2O95994 175 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 C8BP07358 591 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 FCER1AP12319 257 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 SYN1P17600 705 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 SLC1A4P43007 532 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 STAT2P52630 851 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 HAND2P61296 217 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 MTM1Q13496 603 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 KCTD2Q14681 263 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 CCL14Q16627 93 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 FLYWCH1Q4VC44 716 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 AKNAD1Q5T1N1 836 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
LSM5-203ENST00000409782 FAM160B2Q86V87 743 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 TBC1D10CQ8IV04 446 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 OR6B3Q8NGW1 331 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 ESR2Q92731 530 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 UBXN10Q96LJ8 280 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 GDF15Q99988 308 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 MAGEH1Q9H213 219 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 SLC38A10Q9HBR0 1119 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 TCP11L1Q9NUJ3 509 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 RRN3Q9NYV6 651 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
LSM5-203ENST00000409782 FRMPD3Q5JV73 1810 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 NEDD4P46934 1319 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 ZNF213O14771 459 aa6.87□□□□□ -1.31
LSM5-203ENST00000409782 AREL1O15033 823 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms