RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TDRD10Q5VZ19 366 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 CYP4F22Q6NT55 531 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 LLGL2Q6P1M3 1020 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SPATA31D4Q6ZUB0 917 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 DHDDSQ86SQ9 333 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TTC7BQ86TV6 843 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 FAM160B2Q86V87 743 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 BPHLQ86WA6 291 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 SCUBE1Q8IWY4 988 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 THNSL1Q8IYQ7 743 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZBED8Q8IZ13 594 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SYCP3Q8IZU3 236 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PPM1KQ8N3J5 372 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 WDTC1Q8N5D0 677 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF511Q8NB15 262 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.27□□□□□ -1.89
CUL3-204ENST00000409777 MCUQ8NE86 351 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CMASQ8NFW8 434 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 CCDC110Q8TBZ0 833 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 OPTNQ96CV9 577 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 MTBPQ96DY7 904 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CRELD1Q96HD1 420 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CYTH2Q99418 400 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CENPKQ9BS16 269 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 IER2Q9BTL4 223 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 HAPLN2Q9GZV7 340 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PCIF1Q9H4Z3 704 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF385DQ9H6B1 395 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 POPDC2Q9HBU9 364 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 NEUROD4Q9HD90 331 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 KCNH7Q9NS40 1196 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TBC1D22BQ9NU19 505 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SEPT11Q9NVA2 429 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 DNAJC17Q9NVM6 304 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 DNAJC28Q9NX36 388 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 COL20A1Q9P218 1284 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CNOT11Q9UKZ1 510 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF510Q9Y2H8 683 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 MRPL11Q9Y3B7 192 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 IQANK1A0A1B0GTG1 560 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TCRBV7S3A2A0A539 114 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TNFRSF10BO14763 440 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PPEF1O14829 653 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC22A2O15244 555 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ZSCAN9O15535 394 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CCNE2O96020 404 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SERPINB2P05120 415 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ICAM1P05362 532 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CALB1P05937 261 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MYL2P10916 166 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CCDC130P13994 396 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NPR3P17342 541 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TAL1P17542 331 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CD58P19256 250 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TBXAS1P24557 533 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 YWHABP31946 246 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CETN2P41208 172 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MAGEA8P43361 318 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NSFP46459 744 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 PSMD8P48556 350 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 JAK3P52333 1124 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 STAT2P52630 851 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 GDF10P55107 478 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 AP2B1P63010 937 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PDE1BQ01064 536 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAAP100Q0VG06 881 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SF3A3Q12874 501 aaKnown RBP eCLIP3.26□□□□□ -1.89
CUL3-204ENST00000409777 ORC1Q13415 861 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PICALMQ13492 652 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ABCB5Q2M3G0 1257 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ANKRD20A4Q4UJ75 823 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SFT2D3Q587I9 215 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 C4orf48Q5BLP8 95 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FAXCQ5TGI0 409 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TTC39BQ5VTQ0 682 aaPredicted RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 MBLAC2Q68D91 279 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TXNRD3NBQ6F5E7 133 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 XRRA1Q6P2D8 792 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 IZUMO2Q6UXV1 221 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC30A10Q6XR72 485 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 CDHR3Q6ZTQ4 885 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RAPH1Q70E73 1250 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SMIM5Q71RC9 77 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 MAVSQ7Z434 540 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 ZBTB33Q86T24 672 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 USP37Q86T82 979 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PASD1Q8IV76 773 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 TNS4Q8IZW8 715 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 AHI1Q8N157 1196 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 NME8Q8N427 588 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 SLC4A11Q8NBS3 891 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 PPFIBP2Q8ND30 876 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 DIS3LQ8TF46 1054 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 CPA5Q8WXQ8 436 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 RPGRQ92834 1020 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 LRRC39Q96DD0 335 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 DUS3LQ96G46 650 aaKnown RBP3.26□□□□□ -1.89
CUL3-204ENST00000409777 UIMC1Q96RL1 719 aa3.26□□□□□ -1.89
CUL3-204ENST00000409777 FNBP1Q96RU3 617 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms