RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PGFP49763 221 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 DEUP1Q05D60 604 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 NME3Q13232 169 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 PDK2Q15119 407 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 BSPRYQ5W0U4 402 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 BBS12Q6ZW61 710 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 FAM71BQ8TC56 605 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SPPL2BQ8TCT7 592 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 AENQ8WTP8 325 aaKnown RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SEC14L1Q92503 715 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SLCO2A1Q92959 643 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 TMEM169Q96HH4 297 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 KCTD15Q96SI1 283 aaPredicted RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 TRIM31Q9BZY9 425 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 RAB17Q9H0T7 212 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 DPH5Q9H2P9 285 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 HOMER3Q9NSC5 361 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 RASAL2Q9UJF2 1139 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 FZD10Q9ULW2 581 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 SLC27A5Q9Y2P5 690 aa14.65□□□□□ -0.06
GPNMB-203ENST00000409458 UTP11Q9Y3A2 253 aaKnown RBP14.65□□□□□ -0.06
GPNMB-203ENST00000409458 GREB1Q4ZG55 1949 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 WDR27A2RRH5 827 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 DAPK3O43293 454 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 ECEL1O95672 775 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 HAPLN1P10915 354 aaPredicted RBP14.64□□□□□ -0.07
GPNMB-203ENST00000409458 IL4RP24394 825 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 YWHAGP61981 247 aaKnown RBP eCLIP14.64□□□□□ -0.07
GPNMB-203ENST00000409458 USP46P62068 366 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 ROR1Q01973 937 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 KRT17Q04695 432 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 SMARCB1Q12824 385 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 DPYSL2Q16555 572 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 MGAT5BQ3V5L5 792 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 MAP9Q49MG5 647 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 SLC8B1Q6J4K2 584 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 TAC4Q86UU9 113 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 NUP93Q8N1F7 819 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 GPR152Q8TDT2 470 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 CCDC114Q96M63 670 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 ERP44Q9BS26 406 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 DHX35Q9H5Z1 703 aaKnown RBP14.64□□□□□ -0.07
GPNMB-203ENST00000409458 FAM204AQ9H8W3 233 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 NMUR1Q9HB89 426 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
GPNMB-203ENST00000409458 TMPRSS4Q9NRS4 437 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 MTMR10Q9NXD2 777 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 CXXC1Q9P0U4 656 aaPredicted RBP14.64□□□□□ -0.07
GPNMB-203ENST00000409458 NFU1Q9UMS0 254 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 BACE2Q9Y5Z0 518 aa14.64□□□□□ -0.07
GPNMB-203ENST00000409458 GJB5O95377 273 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 L1CAMP32004 1257 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 GLUD2P49448 558 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 DSG1Q02413 1049 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 ANKRD20A8PQ5CZ79 823 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 PPP6R3Q5H9R7 873 aaPredicted RBP14.63□□□□□ -0.07
GPNMB-203ENST00000409458 TMEM240Q5SV17 173 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 DUPD1Q68J44 220 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 KIAA1841Q6NSI8 718 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 BEND5Q7L4P6 421 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 SCD5Q86SK9 330 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 VSIG1Q86XK7 387 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 MAP7D3Q8IWC1 876 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 PYROXD2Q8N2H3 581 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 DQX1Q8TE96 717 aaKnown RBP14.63□□□□□ -0.07
GPNMB-203ENST00000409458 C2orf15Q8WU43 125 aaKnown RBP14.63□□□□□ -0.07
GPNMB-203ENST00000409458 FAF2Q96CS3 445 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 PGAP3Q96FM1 320 aaPredicted RBP14.63□□□□□ -0.07
GPNMB-203ENST00000409458 GDAP1L1Q96MZ0 367 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 RNF157Q96PX1 679 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 ZNF670Q9BS34 389 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 NEUROG2Q9H2A3 272 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 RRN3Q9NYV6 651 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 SPG21Q9NZD8 308 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 SAE1Q9UBE0 346 aaPredicted RBP14.63□□□□□ -0.07
GPNMB-203ENST00000409458 DNPEPQ9ULA0 475 aa14.63□□□□□ -0.07
GPNMB-203ENST00000409458 ZNF638Q14966 1978 aaKnown RBP14.62□□□□□ -0.07
GPNMB-203ENST00000409458 A0A1W2PQH9 124 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 SASH3O75995 380 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 LINC00271P0C7V0 271 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
GPNMB-203ENST00000409458 OR1D2P34982 312 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 HTRA4P83105 476 aaPredicted RBP14.62□□□□□ -0.07
GPNMB-203ENST00000409458 OTUD4Q01804 1114 aaKnown RBP14.62□□□□□ -0.07
GPNMB-203ENST00000409458 DUSP4Q13115 394 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 CUL1Q13616 776 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 PPP1R7Q15435 360 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 DRICH1Q6PGQ1 229 aaPredicted RBP14.62□□□□□ -0.07
GPNMB-203ENST00000409458 PQLC3Q8N755 202 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 ATL2Q8NHH9 583 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 ACTL9Q8TC94 416 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 GRK7Q8WTQ7 553 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 CLSTN3Q9BQT9 956 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 TRIM62Q9BVG3 475 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 ANLNQ9NQW6 1124 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 DDIT4Q9NX09 232 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
GPNMB-203ENST00000409458 IGLV3-25P01717 112 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms