RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 BEND5Q7L4P6 421 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 STRADAQ7RTN6 431 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 TAC4Q86UU9 113 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 ARHGAP18Q8N392 663 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 DQX1Q8TE96 717 aaKnown RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 EHD2Q9NZN4 543 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 USP18Q9UMW8 372 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 HCFC2Q9Y5Z7 792 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 RFPL2O75678 378 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 TRUB2O95900 331 aaKnown RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 PRLRP16471 622 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 DESP17661 470 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 TCP1P17987 556 aaKnown RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 NME3Q13232 169 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 KCNT1Q5JUK3 1230 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 SCYL2Q6P3W7 929 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 ITIH5Q86UX2 942 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 CASP10Q92851 521 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 FAM204AQ9H8W3 233 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 ZNF334Q9HCZ1 680 aaPredicted RBP17.56■□□□□ 0.4
SSB-202ENST00000409333 PIGVQ9NUD9 493 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSB-202ENST00000409333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSB-202ENST00000409333 MRFAP1Q9Y605 127 aa17.56■□□□□ 0.4
SSB-202ENST00000409333 CCL16O15467 120 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 TADA3O75528 432 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 ENDOD1O94919 500 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 RARGP13631 454 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 NRIP1P48552 1158 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 PSEN1P49768 467 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 ZNF211Q13398 564 aaPredicted RBP17.55■□□□□ 0.4
SSB-202ENST00000409333 AADACL2Q6P093 401 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 MS4A14Q96JA4 679 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 ZNF512Q96ME7 567 aaPredicted RBP17.55■□□□□ 0.4
SSB-202ENST00000409333 SMOC2Q9H3U7 446 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 PLEKHA4Q9H4M7 779 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 ZNF576Q9H609 170 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 TLE6Q9H808 572 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 DDIT4Q9NX09 232 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 RRN3Q9NYV6 651 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 CLIC5Q9NZA1 410 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 SFMBT1Q9UHJ3 866 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 CDC23Q9UJX2 597 aa17.55■□□□□ 0.4
SSB-202ENST00000409333 PRRC2BQ5JSZ5 2229 aaKnown RBP17.55■□□□□ 0.4
SSB-202ENST00000409333 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 C1RP00736 705 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 IGLV3-25P01717 112 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
SSB-202ENST00000409333 RWDD2BP57060 319 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 DEUP1Q05D60 604 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 DUSP6Q16828 381 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 HADHQ16836 314 aaKnown RBP17.54■□□□□ 0.4
SSB-202ENST00000409333 LRRC38Q5VT99 294 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 RSRC2Q7L4I2 434 aaKnown RBP17.54■□□□□ 0.4
SSB-202ENST00000409333 POLNQ7Z5Q5 900 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 FAM131BQ86XD5 332 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 KATNAL2Q8IYT4 538 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 CCDC185Q8N715 623 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 PDZD8Q8NEN9 1154 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 RNF139Q8WU17 664 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 UBE2Q2Q8WVN8 375 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 OVCA2Q8WZ82 227 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 PGAP3Q96FM1 320 aaPredicted RBP17.54■□□□□ 0.4
SSB-202ENST00000409333 CARD9Q9H257 536 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 CCSER2Q9H7U1 834 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 COLQQ9Y215 455 aaPredicted RBP17.54■□□□□ 0.4
SSB-202ENST00000409333 ASB3Q9Y575 518 aa17.54■□□□□ 0.4
SSB-202ENST00000409333 MDM4O15151 490 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 MSI1O43347 362 aaKnown RBP17.53■□□□□ 0.4
SSB-202ENST00000409333 ZMYND10O75800 440 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 TBX18O95935 607 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 RARAP10276 462 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 PYGMP11217 842 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 RALAP11233 206 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSB-202ENST00000409333 MSANTD2Q6P1R3 559 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 HS6ST3Q8IZP7 471 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 MRPL38Q96DV4 380 aaKnown RBP17.53■□□□□ 0.4
SSB-202ENST00000409333 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
SSB-202ENST00000409333 SMARCAL1Q9NZC9 954 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 UXTQ9UBK9 157 aaPredicted RBP17.53■□□□□ 0.4
SSB-202ENST00000409333 ZNF840PA6NDX5 716 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 KRT1P04264 644 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 KRT7P08729 469 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 LRIT3Q3SXY7 679 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 ZFYVE27Q5T4F4 411 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 ZNF697Q5TEC3 545 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 SNX30Q5VWJ9 437 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 TMC8Q8IU68 726 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 ELMOD1Q8N336 334 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 HSPH1Q92598 858 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 PBKQ96KB5 322 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 NCAPGQ9BPX3 1015 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms