RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 PCDHGA3Q9Y5H0 932 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SCAF11Q99590 1463 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 ATP9AO75110 1047 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ZC3H11AO75152 810 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEB-204ENST00000409198 RCVRNP35243 200 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 DDX39BQ13838 428 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 SNAP47Q5SQN1 464 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SLC2A7Q6PXP3 512 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 FBXO33Q7Z6M2 555 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PROSER1Q86XN7 944 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TTC29Q8NA56 475 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 HAPLN3Q96S86 360 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 POP1Q99575 1024 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 STRADBQ9C0K7 418 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ABCC12Q96J65 1359 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 KCNA5P22460 613 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SLC7A2P52569 658 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SLC29A2Q14542 456 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ZNF846Q147U1 533 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 NKX1-1Q15270 411 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 FAM20AQ96MK3 541 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SENP6Q9GZR1 1112 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 NDST4Q9H3R1 872 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PIPSLA2A3N6 862 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CAPN14A8MX76 684 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SMNDC1O75940 238 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEB-204ENST00000409198 DNASE1L1P49184 302 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RAD23BP54727 409 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 INSCQ1MX18 579 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CENPLQ8N0S6 344 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 CACTIN-AS1Q8N1I8 211 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 LRRC71Q8N4P6 559 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 DNAAF1Q8NEP3 725 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 C18orf8Q96DM3 657 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SNX8Q9Y5X2 465 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PDS5AQ29RF7 1337 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 MED23Q9ULK4 1368 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ABCC2Q92887 1545 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 EIF2AK4Q9P2K8 1649 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 ANKDD1BA6NHY2 528 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 APODP05090 189 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CSH1P0DML2 217 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CSH2P0DML3 217 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TCF7P36402 384 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 STAT5AP42229 794 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RUNX2Q13950 521 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 THRSPQ92748 146 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RADILQ96JH8 1075 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 G3V2T6 193 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PDCD5O14737 125 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CPA1P15085 419 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CRKLP46109 303 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ZNF445P59923 1031 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TRAP1Q12931 704 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 SCARF1Q14162 830 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 NLRP10Q86W26 655 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SLC4A11Q8NBS3 891 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 THUMPD3Q9BV44 507 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 MRPL1Q9BYD6 325 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 C14orf93Q9H972 538 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ADARB2Q9NS39 739 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 MAPRE3Q9UPY8 281 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RAD54BQ9Y620 910 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 MIF4GDA9UHW6 222 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 POLRMTO00411 1230 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 IGF2BP3O00425 579 aaKnown RBP eCLIP3.48□□□□□ -1.85
NEB-204ENST00000409198 PCCAP05165 728 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ATG9AQ7Z3C6 839 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ATCAYQ86WG3 371 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 UBE2E3Q969T4 207 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 STARD13Q9Y3M8 1113 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SLC28A1O00337 649 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CAPZA1P52907 286 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 MYBPC2Q14324 1141 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SPATA1Q5VX52 437 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CHST13Q8NET6 341 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TMEM68Q96MH6 324 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PRDM16Q9HAZ2 1276 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RIMBP3CA6NJZ7 1639 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RIMBP3BA6NNM3 1639 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RIMBP3Q9UFD9 1639 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TMEM114B3SHH9 223 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 BPNT1O95861 308 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 NR3C2P08235 984 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 NLRP11P59045 1033 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 GUCY2DQ02846 1103 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CPA6Q8N4T0 437 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 FIBCD1Q8N539 461 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 THAP11Q96EK4 314 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CBWD1Q9BRT8 395 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 EPB41L4BQ9H329 900 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CXorf56Q9H5V9 222 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 WASF3Q9UPY6 502 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 IGF1RP08069 1367 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 BCLAF3A2AJT9 711 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 NOL4O94818 638 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SASH1O94885 1247 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 FTLP02792 175 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ARFIP2P53365 341 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ITGA1P56199 1179 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms