RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CCDC185Q8N715 623 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 CKAP2Q8WWK9 683 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 FAM149B1Q96BN6 582 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 CABS1Q96KC9 395 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 CSPG4P5Q96PW8 444 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 ACSS3Q9H6R3 686 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 PRDM16Q9HAZ2 1276 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 LRRC4Q9HBW1 653 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 DDX43Q9NXZ2 648 aaKnown RBP17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 RABGEF1Q9UJ41 708 aa17.24■□□□□ 0.35
PIKFYVE-204ENST00000407449 TRIM66O15016 1216 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 FLT3LGP49771 235 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 YWHAZP63104 245 aaKnown RBP17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 IFT88Q13099 833 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 MPP2Q14168 576 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 PIGWQ7Z7B1 504 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 PALM2Q8IXS6 379 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 CCDC197Q8NCU1 140 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 CRTAC1Q9NQ79 661 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 FZD10Q9ULW2 581 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 TSC2P49815 1807 aa17.23■□□□□ 0.35
PIKFYVE-204ENST00000407449 ARL5CA6NH57 179 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 FAM47DPA6NHR8 397 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SSTR1P30872 391 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 RPL9P32969 192 aaKnown RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 NOS2P35228 1153 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 MAGEA6P43360 314 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SLC45A4Q5BKX6 768 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 OTUD1Q5VV17 481 aaPredicted RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 KIAA0319Q5VV43 1072 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 DSTYKQ6XUX3 929 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 BNIPLQ7Z465 357 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 LPPQ93052 612 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 NT5C3BQ969T7 300 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SGSM3Q96HU1 749 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 QKIQ96PU8 341 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■□□□□ 9.7
PIKFYVE-204ENST00000407449 SLC2A13Q96QE2 648 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 DHRS4Q9BTZ2 278 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 KLC2Q9H0B6 622 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 KRT82Q9NSB4 513 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 MIOSQ9NXC5 875 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 CACNG4Q9UBN1 327 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 STAP1Q9ULZ2 295 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 USP3Q9Y6I4 520 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 PRPF4O43172 522 aaKnown RBP eCLIP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 BEST1O76090 585 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 FBXO21O94952 628 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 KRT15P19012 456 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 IGFBP6P24592 240 aaPredicted RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 ARL4AP40617 200 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 RAB27AP51159 221 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SCNN1GP51170 649 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 CLCNKBP51801 687 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SLC18A1P54219 525 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 GBE1Q04446 702 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 PKN2Q16513 984 aaKnown RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 AGMOQ6ZNB7 445 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 C3orf62Q6ZUJ4 267 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 FAM35AQ86V20 835 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 FBF1Q8TES7 1133 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 NPY6RQ99463 290 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 ETNK2Q9NVF9 386 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 CHMP2BQ9UQN3 213 aa17.22■□□□□ 0.35
PIKFYVE-204ENST00000407449 GOLGA6L7A0A1B0GV03 622 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 SPAG6O75602 509 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 STX2P32856 288 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 AFF1P51825 1210 aaKnown RBP17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 ITIH4Q14624 930 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 DCAF6Q58WW2 860 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 RNF187Q5TA31 235 aaPredicted RBP17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 NCBP2-AS2Q69YL0 99 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 CCDC121Q6ZUS5 278 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 FAM131BQ86XD5 332 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 NDRG1Q92597 394 aaKnown RBP17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 RASSF4Q9H2L5 321 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 CDH9Q9ULB4 789 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 TEX264Q9Y6I9 313 aa17.21■□□□□ 0.35
PIKFYVE-204ENST00000407449 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 ZNF623O75123 536 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 GCATO75600 419 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 AP1G2O75843 785 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 ASGR1P07306 291 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 THPOP40225 353 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 ELK3P41970 407 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 TKTL1P51854 596 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 MAP3K7CLP57077 242 aa17.2■□□□□ 0.34
PIKFYVE-204ENST00000407449 CACNB2Q08289 660 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms