RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SERPING1P05155 500 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 HMGA1P17096 107 aaKnown RBP11.08□□□□□ -0.64
RPAIN-204ENST00000405578 TNFAIP3P21580 790 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPAIN-204ENST00000405578 GABRR2P28476 465 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 GPD2P43304 727 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 PSEN1P49768 467 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 CCR3P51677 355 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 EPHA5P54756 1037 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 DENND1BQ6P3S1 775 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 UNQ6494/PRO21346Q6UXR6 183 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 PASD1Q8IV76 773 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 STKLD1Q8NE28 680 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 SLC35F5Q8WV83 523 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 FBXO32Q969P5 355 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 AGPAT1Q99943 283 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 ZSWIM1Q9BR11 485 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 TTLL2Q9BWV7 592 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 PLA2G2FQ9BZM2 168 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 ATXN3LQ9H3M9 355 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 SLITRK6Q9H5Y7 841 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 TLR8Q9NR97 1041 aaKnown RBP11.08□□□□□ -0.64
RPAIN-204ENST00000405578 HCFC1R1Q9NWW0 138 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 SCML2Q9UQR0 700 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 EML5Q05BV3 1969 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 ASPMQ8IZT6 3477 aa11.08□□□□□ -0.64
RPAIN-204ENST00000405578 SOBPA7XYQ1 873 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 CHURC1-FNTBB4DL54 471 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TNFRSF10BO14763 440 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 HRO43593 1189 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 MFAP3LO75121 409 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ZBED1O96006 694 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ABL1P00519 1130 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 MMEP08473 750 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 PRKCIP41743 596 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 NSFP46459 744 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 FNTBP49356 437 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 RGS7P49802 495 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TKTL1P51854 596 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 KIF11P52732 1056 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 LIMK1P53667 647 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 SATB1Q01826 763 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ADIGQ0VDE8 80 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TAF10Q12962 218 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 PDCLQ13371 301 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 SF3A2Q15428 464 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TADA2BQ86TJ2 420 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 MON1AQ86VX9 555 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ERICH1Q86X53 443 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TMC8Q8IU68 726 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 C1orf131Q8NDD1 294 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 SCAMP5Q8TAC9 235 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 COL26A1Q96A83 441 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 PPP1R13BQ96KQ4 1090 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 CDK5RAP1Q96SZ6 601 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 DEF6Q9H4E7 631 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 HAUS4Q9H6D7 363 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 CNGB3Q9NQW8 809 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 ABHD10Q9NUJ1 306 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 TMEM30AQ9NV96 361 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 GDE1Q9NZC3 331 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 IL37Q9NZH6 218 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 NOCTQ9UK39 431 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
RPAIN-204ENST00000405578 NCANO14594 1321 aa11.07□□□□□ -0.64
RPAIN-204ENST00000405578 KIF26AQ9ULI4 1882 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 FAM92AA1XBS5 289 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 HHLA1C9JL84 531 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 TM4SF5O14894 197 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 ECI2O75521 394 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 USP17L7P0C7H9 530 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 RALAP11233 206 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 LCP1P13796 627 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 PFKLP17858 780 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 HNRNPH3P31942 346 aaKnown RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 CDH5P33151 784 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 USP46P62068 366 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-204ENST00000405578 GSE1Q14687 1217 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 CCDC6Q16204 474 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 RAB41Q5JT25 222 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 PMF1Q6P1K2 205 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 TOGARAM2Q6ZUX3 1019 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 CCDC186Q7Z3E2 898 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 TMEM110Q86TL2 294 aa11.06□□□□□ -0.64
RPAIN-204ENST00000405578 ZDHHC17Q8IUH5 632 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms