RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MAGEA10P43363 369 aaPredicted RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ASPAP45381 313 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SCNN1GP51170 649 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PLCB3Q01970 1234 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FASTKD3Q14CZ7 662 aaKnown RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZBED8Q8IZ13 594 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FITM2Q8N6M3 262 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KLHL29Q96CT2 875 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CASD1Q96PB1 797 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PSMC3IPQ9P2W1 217 aaPredicted RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GGT7Q9UJ14 662 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FARP1Q9Y4F1 1045 aaPredicted RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PDCD11Q14690 1871 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 XPOTO43592 962 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 UPP2O95045 317 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KRT15P19012 456 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PHBP35232 272 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KCNJ2P63252 427 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GRIK3Q13003 919 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PDIA2Q13087 525 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TAZQ16635 292 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HIF1AQ16665 826 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HADHQ16836 314 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZNF394Q53GI3 561 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CYP4A22Q5TCH4 519 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DENND1BQ6P3S1 775 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PPIL6Q8IXY8 311 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ABI1Q8IZP0 508 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 HAUS1Q96CS2 278 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RMDN2Q96LZ7 410 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PAIP2Q9BPZ3 127 aaKnown RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TMEM121Q9BTD3 319 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ARHGEF3Q9NR81 526 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DPP3Q9NY33 737 aa16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CXXC1Q9P0U4 656 aaPredicted RBP16.58■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SMAPO00193 183 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SPAG7O75391 227 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 POMCP01189 267 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 IFNB1P01574 187 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 WEE2P0C1S8 567 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ALADP13716 330 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CCNB1P14635 433 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ARL4CP56559 192 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PDK4Q16654 411 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 EFHC2Q5JST6 749 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 BBS12Q6ZW61 710 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ASRGL1Q7L266 308 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 C1orf127Q8N9H9 656 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 BEST2Q8NFU1 509 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FBF1Q8TES7 1133 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 C18orf25Q96B23 403 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MYCBPQ99417 103 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 WDR35Q9P2L0 1181 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ITGA11Q9UKX5 1188 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 INPP5FQ9Y2H2 1132 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 KRT3P12035 628 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GEMIN4P57678 1058 aaKnown RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SCARA5Q6ZMJ2 495 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ATP11CQ8NB49 1132 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZNF689Q96CS4 500 aaPredicted RBP16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 FAXDC2Q96IV6 333 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TXLNGQ9NUQ3 528 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TUBGCP4Q9UGJ1 667 aa16.57■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GOLGA8SH3BPF8 625 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ATP5HO75947 161 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TSHRP16473 764 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RFC1P35251 1148 aaPredicted RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 OTUD4Q01804 1114 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SOX4Q06945 474 aaPredicted RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MGAT5Q09328 741 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SETDB1Q15047 1291 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PTPN20Q4JDL3 420 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ZC3H12AQ5D1E8 599 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ACTL9Q8TC94 416 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GDF15Q99988 308 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 RC3H2Q9HBD1 1191 aaKnown RBP16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 SLC4A7Q9Y6M7 1214 aa16.56■□□□□ 0.24
CHRFAM7A-203ENST00000401522 LRCH4O75427 683 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GJB5O95377 273 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 ITGB3P05106 788 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CD19P15391 556 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 LRPAP1P30533 357 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 GATMP50440 423 aa16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-203ENST00000401522 DSC1Q08554 894 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms