RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00544-201ENST00000400540 CACNA2D2Q9NY47 1150 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 NUDT5Q9UKK9 219 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 STARD13Q9Y3M8 1113 aa12.6□□□□□ -0.39
LINC00544-201ENST00000400540 NYNRINQ9P2P1 1898 aaKnown RBP12.59□□□□□ -0.39
LINC00544-201ENST00000400540 ATRXP46100 2492 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 WASH3PC4AMC7 463 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 OPHN1O60890 802 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 YEATS4O95619 227 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 CD59P13987 128 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 ADORA2BP29275 332 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 DPP6P42658 865 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 CLDN10P78369 228 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 COL9A2Q14055 689 aaPredicted RBP12.59□□□□□ -0.39
LINC00544-201ENST00000400540 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
LINC00544-201ENST00000400540 HTR3DQ70Z44 454 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 CHCHD4Q8N4Q1 142 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 CEP76Q8TAP6 659 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 TWNKQ96RR1 684 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 GABRG3Q99928 467 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 NMUR1Q9HB89 426 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 TLR8Q9NR97 1041 aaKnown RBP12.59□□□□□ -0.39
LINC00544-201ENST00000400540 COMMD8Q9NX08 183 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
LINC00544-201ENST00000400540 A0A1W2PQH9 124 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 KLRC4O43908 158 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 CISD3P0C7P0 127 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 MAOBP27338 520 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 ASPAP45381 313 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 DGKGP49619 791 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 STK4Q13043 487 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 ZACNQ401N2 412 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 CLEC20AQ6ZU45 233 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 KIAA0895Q8NCT3 520 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 ZNF396Q96N95 335 aaPredicted RBP12.58□□□□□ -0.4
LINC00544-201ENST00000400540 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
LINC00544-201ENST00000400540 FBXO44Q9H4M3 255 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 DMAC2Q9NW81 257 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
LINC00544-201ENST00000400540 CGNQ9P2M7 1197 aaKnown RBP12.58□□□□□ -0.4
LINC00544-201ENST00000400540 PLXNA2O75051 1894 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 ZNF217O75362 1048 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 ATP5C1P36542 298 aaKnown RBP12.57□□□□□ -0.4
LINC00544-201ENST00000400540 AP3M2P53677 418 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 RING1Q06587 406 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 PLEKHG6Q3KR16 790 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
LINC00544-201ENST00000400540 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 DNAAF2Q9NVR5 837 aaKnown RBP12.57□□□□□ -0.4
LINC00544-201ENST00000400540 LSM7Q9UK45 103 aaKnown RBP12.57□□□□□ -0.4
LINC00544-201ENST00000400540 SCML2Q9UQR0 700 aa12.57□□□□□ -0.4
LINC00544-201ENST00000400540 BPTFQ12830 3046 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 K7ELQ4 463 aaPredicted RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 TAF4O00268 1085 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 SH3BP5O60239 455 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 GJB3O75712 270 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 RARGP13631 454 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 ACO1P21399 889 aaKnown RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 PIK3CAP42336 1068 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 SDE2Q6IQ49 451 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 Q6ZNB5 142 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 SV2AQ7L0J3 742 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 RABEPKQ7Z6M1 372 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 RAB44Q7Z6P3 723 aaPredicted RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 ZNF419Q96HQ0 510 aaPredicted RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00544-201ENST00000400540 WDR35Q9P2L0 1181 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 SERTAD1Q9UHV2 236 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 STON1Q9Y6Q2 735 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
LINC00544-201ENST00000400540 NDUFS2O75306 463 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 STC2O76061 302 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 KLKB1P03952 638 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 NR3C1P04150 777 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 SYPP08247 313 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms