RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SYNCQ9H7C4 482 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 METTL5Q9NRN9 209 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GKN1Q9NS71 199 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ABCC13Q9NSE7 274 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SMPD4Q9NXE4 827 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARHGAP26Q9UNA1 814 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NAALADL1Q9UQQ1 740 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NUMBLQ9Y6R0 609 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MYO10Q9HD67 2058 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 HSF2BPO75031 334 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 IGLV3-25P01717 112 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CALB1P05937 261 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ASGR2P07307 311 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GLI1P08151 1106 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TCF3P15923 654 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TFE3P19532 575 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FLT3P36888 993 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 AVPR1AP37288 418 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 YWHAZP63104 245 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 EIF4EBP2Q13542 120 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF77Q15935 545 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 EFHC1Q5JVL4 640 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ALKBH5Q6P6C2 394 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RAD9BQ6WBX8 426 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TAC4Q86UU9 113 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DEFB106AQ8N104 65 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 EMC1Q8N766 993 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 C3orf20Q8ND61 904 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 DQX1Q8TE96 717 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARHGEF26Q96DR7 871 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PACSIN1Q9BY11 444 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 POPDC2Q9HBU9 364 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TDP1Q9NUW8 608 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SFMBT1Q9UHJ3 866 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZMYM5Q9UJ78 669 aa12.98□□□□□ -0.33
HLA-DQB1-203ENST00000399082 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 LEFTY2O00292 366 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MSI1O43347 362 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ECI2O75521 394 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 LCA5LO95447 670 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RALAP11233 206 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NCAM1P13591 858 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ATP5C1P36542 298 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SNX16P57768 344 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 EFEMP1Q12805 493 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RAB6CQ53S08 254 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CCDC122Q5T0U0 273 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 BNIPLQ7Z465 357 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MIB1Q86YT6 1006 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADAM32Q8TC27 787 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SH3RF2Q8TEC5 729 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 NT5C3BQ969T7 300 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ELSPBP1Q96BH3 223 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ASIC4Q96FT7 647 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CCDC42Q96M95 316 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TRIM7Q9C029 511 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RAB6CQ9H0N0 254 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 THAP2Q9H0W7 228 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KCNK12Q9HB15 430 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 WDR35Q9P2L0 1181 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RASAL2Q9UJF2 1139 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 STRIP2Q9ULQ0 834 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 VCANP13611 3396 aa12.97□□□□□ -0.33
HLA-DQB1-203ENST00000399082 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 SCAMP3O14828 347 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 AKR1B10O60218 316 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 STC2O76061 302 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 IGLV3-27P01718 113 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 KLKB1P03952 638 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ABCB4P21439 1286 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MATKP42679 507 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GALCP54803 685 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RNASE9P60153 205 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 RPL7AP62424 266 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OGDHQ02218 1023 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MAMLD1Q13495 774 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms