RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 BTBD10Q9BSF8 475 aa11.77□□□□□ -0.53
RCC1-204ENST00000398958 CALN1Q9BXU9 219 aa11.77□□□□□ -0.53
RCC1-204ENST00000398958 MIS12Q9H081 205 aa11.77□□□□□ -0.53
RCC1-204ENST00000398958 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
RCC1-204ENST00000398958 INPP5FQ9Y2H2 1132 aa11.77□□□□□ -0.53
RCC1-204ENST00000398958 GYG2O15488 501 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 GSC2O15499 205 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 MAP3K7O43318 606 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 PSMG1O95456 288 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 PYGLP06737 847 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■□□□ 12
RCC1-204ENST00000398958 FGFR1P11362 822 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 CCND3P30281 292 aaPredicted RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 IFRD2Q12894 506 aaPredicted RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 TFDP1Q14186 410 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 CTC1Q2NKJ3 1217 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 PLEKHG4Q58EX7 1191 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 TWF2Q6IBS0 349 aaKnown RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 KATNAL2Q8IYT4 538 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 CCDC89Q8N998 374 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 SLC4A11Q8NBS3 891 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 FAM81BQ96LP2 452 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 PSTPIP1O43586 416 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 LIASO43766 372 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 TSPAN1O60635 241 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 MICAL2O94851 1124 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 HAUS5O94927 633 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 RANBP1P43487 201 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
RCC1-204ENST00000398958 TBC1D25Q3MII6 688 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 TRIM72Q6ZMU5 477 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 TRIB2Q92519 343 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 VPS37BQ9H9H4 285 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 CNTN6Q9UQ52 1028 aa11.76□□□□□ -0.53
RCC1-204ENST00000398958 A0A0G2JND7 137 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 F8W810 466 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 STRNO43815 780 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 CST8O60676 142 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 LRCH4O75427 683 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ZWINTO95229 277 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ABHD2P08910 425 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 PROZP22891 400 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ADORA2BP29275 332 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 CETN2P41208 172 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 AP1B1Q10567 949 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 MFSD10Q14728 455 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 SEPT7Q16181 437 aaKnown RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 SPDYAQ5MJ70 313 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ANKRD22Q5VYY1 191 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 SCYL2Q6P3W7 929 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 RFX8Q6ZV50 586 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.532e-18■■■■□ 23.2
RCC1-204ENST00000398958 EXD1Q8NHP7 514 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 WDR60Q8WVS4 1066 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 GATA6Q92908 595 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ITFG2Q969R8 447 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 HPDLQ96IR7 371 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 AP5M1Q9H0R1 490 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 DPEP3Q9H4B8 488 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 HEY2Q9UBP5 337 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 SPTBN5Q9NRC6 3674 aaKnown RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 TCRBV5S1A1TA0A578 114 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 CALB1P05937 261 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 CYP3A5P20815 502 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 GSTT1P30711 240 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 NDST1P52848 882 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 OTUD4Q01804 1114 aaKnown RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 ZBTB16Q05516 673 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 EFTUD2Q15029 972 aaKnown RBP eCLIP11.75□□□□□ -0.533e-8■■■■□ 24.7
RCC1-204ENST00000398958 CCNG2Q16589 344 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 LRRC23Q53EV4 343 aaPredicted RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 FAM102AQ5T9C2 384 aaPredicted RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 ZBED8Q8IZ13 594 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 NSL1Q96IY1 281 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 RBM41Q96IZ5 413 aaKnown RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
RCC1-204ENST00000398958 VTA1Q9NP79 307 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 PDP2Q9P2J9 529 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 NEU2Q9Y3R4 380 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
RCC1-204ENST00000398958 hCG_1818297A0A087WSY0 165 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 TCRBV7S3A2A0A539 114 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 KLRC2P26717 231 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 FSCN1Q16658 493 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 OR6B2Q6IFH4 312 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
RCC1-204ENST00000398958 OR6B3Q8NGW1 331 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ACTL9Q8TC94 416 aa11.74□□□□□ -0.53
RCC1-204ENST00000398958 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms