RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NOMO3P69849 1222 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 SH3KBP1Q96B97 665 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 TMA16Q96EY4 203 aaKnown RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 RMDN2Q96LZ7 410 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 FBXO44Q9H4M3 255 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ANLNQ9NQW6 1124 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 CD274Q9NZQ7 290 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 C2CD2Q9Y426 696 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 CNTNAP2Q9UHC6 1331 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 SPEF2Q9C093 1822 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 MAGEB16A2A368 324 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 C2orf81A6NN90 581 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 H0Y626 953 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 OPLAHO14841 1288 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 STMN1P16949 149 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 MAP4P27816 1152 aaKnown RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 TMEM86AQ8N2M4 240 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZCCHC9Q8N567 271 aaKnown RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 CCDC126Q96EE4 140 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 CASS4Q9NQ75 786 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 IGLV3-22A0A075B6J6 115 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 TRPC5OSA6NMA1 111 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZNF135P52742 658 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZCWPW2Q504Y3 356 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 LBX2Q6XYB7 198 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 STRA8Q7Z7C7 330 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 PRELID2Q8N945 189 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 HSFY1Q96LI6 401 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ELOVL4Q9GZR5 314 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ST6GALNAC4Q9H4F1 302 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 DNAJC8O75937 253 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 RALBP11234 206 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 GRK2P25098 689 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 INPP5AQ14642 412 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 C6orf10Q5SRN2 563 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 LRRC43Q8N309 656 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 MREGQ8N565 214 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 OSBPL1AQ9BXW6 950 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 MRPL46Q9H2W6 279 aaKnown RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 RRAGCQ9HB90 399 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 RBM22Q9NW64 420 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 PCDHB5Q9Y5E4 795 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 HACD1B0YJ81 288 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 SSTR1P30872 391 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 ERFP50548 548 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 KPNA1P52294 538 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 MTFR1Q15390 333 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 LZTR1Q8N653 840 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 SENP8Q96LD8 212 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 FOPNLQ96NB1 174 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 GAD1Q99259 594 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 PRDM16Q9HAZ2 1276 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 IARS2Q9NSE4 1012 aaKnown RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZNF446Q9NWS9 450 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 VANGL2Q9ULK5 521 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 RIPK3Q9Y572 518 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 A0A0B4J269 797 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 H2AFYO75367 372 aaKnown RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 SOAT2O75908 522 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 FARP2O94887 1054 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 CALCAP01258 141 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 LRG1P02750 347 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 TNFSF9P41273 254 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 INHBEP58166 350 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 AADACL2Q6P093 401 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 KCNT2Q6UVM3 1135 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 MSL3Q8N5Y2 521 aaKnown RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 MRPS31Q92665 395 aaKnown RBP14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 LRRC19Q9H756 370 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 YY1AP1Q9H869 796 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 TRHDEQ9UKU6 1024 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 ACOT9Q9Y305 439 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 EEF1DP3Q658K8 133 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 YAF2Q8IY57 180 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 RIC8BQ9NVN3 520 aa14.66□□□□□ -0.06
PCDHGA11-201ENST00000398587 COPAP53621 1224 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 OXCT1P55809 520 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 SKOR1P84550 965 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 PDE1CQ14123 709 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 DDX53Q86TM3 631 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 SUGP1Q8IWZ8 645 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 FICDQ9BVA6 458 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 KDM4CQ9H3R0 1056 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 POPDC2Q9HBU9 364 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CHD2O14647 1828 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 LTFP02788 710 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CPA2P48052 419 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZNF143P52747 638 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 IFI35P80217 286 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 BEX3Q00994 111 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 CDH17Q12864 832 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 LRRC39Q96DD0 335 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 TMEM51Q9NW97 253 aa14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 TARSP26639 723 aaKnown RBP14.65□□□□□ -0.06
PCDHGA11-201ENST00000398587 NOS2P35228 1153 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms