RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 KRT37O76014 449 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 KRT5P13647 590 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 MXI1P50539 228 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 CDKL1Q00532 357 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 FLOT2Q14254 428 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 TRIM16LQ309B1 348 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 XAB2Q9HCS7 855 aaKnown RBP15.54■□□□□ 0.08
CYLD-202ENST00000398568 GNPTGQ9UJJ9 305 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 PLLPQ9Y342 182 aa15.54■□□□□ 0.08
CYLD-202ENST00000398568 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 DLG4P78352 724 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 FNBP1LQ5T0N5 605 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 CHPT1Q8WUD6 406 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 C12orf43Q96C57 262 aaKnown RBP15.53■□□□□ 0.08
CYLD-202ENST00000398568 PCIF1Q9H4Z3 704 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 THAP1Q9NVV9 213 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 EBF1Q9UH73 591 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 DRG1Q9Y295 367 aaKnown RBP15.53■□□□□ 0.08
CYLD-202ENST00000398568 SPATA31C1P0DKV0 1188 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 TKTP29401 623 aaKnown RBP15.53■□□□□ 0.08
CYLD-202ENST00000398568 TAS2R40P59535 323 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 ASPRV1Q53RT3 343 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 LIN9Q5TKA1 542 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 TTC39BQ5VTQ0 682 aaPredicted RBP15.53■□□□□ 0.08
CYLD-202ENST00000398568 RINT1Q6NUQ1 792 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.53■□□□□ 0.08
CYLD-202ENST00000398568 ISOC1Q96CN7 298 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 RANBP9Q96S59 729 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 SENP7Q9BQF6 1050 aa15.53■□□□□ 0.08
CYLD-202ENST00000398568 AVENQ9NQS1 362 aaPredicted RBP15.53■□□□□ 0.08
CYLD-202ENST00000398568 A0A1B0GTW7 788 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A9O60656 530 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 CLASP2O75122 1294 aaKnown RBP15.52■□□□□ 0.08
CYLD-202ENST00000398568 SLITRK3O94933 977 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 EIF2S1P05198 315 aaKnown RBP15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A6P19224 532 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A1P22309 533 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A4P22310 534 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A3P35503 534 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A5P35504 534 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 TUBA4AP68366 448 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 PPP3CAQ08209 521 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 NR1D2Q14995 579 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 NDUFA5Q16718 116 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 FBXO33Q7Z6M2 555 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 TMEM121Q9BTD3 319 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 HIPK3Q9H422 1215 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A7Q9HAW7 530 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A10Q9HAW8 530 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 UGT1A8Q9HAW9 530 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
CYLD-202ENST00000398568 NOP56O00567 594 aaKnown RBP15.52■□□□□ 0.08
CYLD-202ENST00000398568 KRT1P04264 644 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 WEE2P0C1S8 567 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 RSPH3Q86UC2 560 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 GPR180Q86V85 440 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 RCOR2Q8IZ40 523 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 MCOLN2Q8IZK6 566 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 SLC44A1Q8WWI5 657 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 PACSIN3Q9UKS6 424 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 DNAJC16Q9Y2G8 782 aa15.52■□□□□ 0.08
CYLD-202ENST00000398568 LRP5O75197 1615 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 PABPC1P11940 636 aaKnown RBP15.52■□□□□ 0.07
CYLD-202ENST00000398568 CDK8P49336 464 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 TRPC3Q13507 836 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 ALCAMQ13740 583 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 MSS51Q4VC12 460 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 EPC2Q52LR7 807 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 ODR4Q5SWX8 454 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 DRICH1Q6PGQ1 229 aaPredicted RBP15.52■□□□□ 0.07
CYLD-202ENST00000398568 CDHR3Q6ZTQ4 885 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 HGH1Q9BTY7 390 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.07
CYLD-202ENST00000398568 ZNRF3Q9ULT6 936 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 UBE4BO95155 1302 aa15.52■□□□□ 0.07
CYLD-202ENST00000398568 PFDN6O15212 129 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 NOL3O60936 208 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 SNRPAP09012 282 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 NELFEP18615 380 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 NSFP46459 744 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 CREB5Q02930 508 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 PDPK2PQ6A1A2 396 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 XKR5Q6UX68 686 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 ZCCHC23Q6ZST2 131 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 MAPKAPK5Q8IW41 473 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 ZNF512Q96ME7 567 aaPredicted RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 FAM96AQ9H5X1 160 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 STN1Q9H668 368 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 DKK3Q9UBP4 350 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 CFAP99D6REC4 459 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 CYB561D2O14569 222 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 ZMPSTE24O75844 475 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 FBXO21O94952 628 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 MCF2P10911 925 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 TSHRP16473 764 aa15.51■□□□□ 0.07
CYLD-202ENST00000398568 CLK2P49760 499 aaKnown RBP15.51■□□□□ 0.07
CYLD-202ENST00000398568 KPNA1P52294 538 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms