RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 NAIF1Q69YI7 327 aaPredicted RBP16.5■□□□□ 0.23
MBD1-207ENST00000398488 MMS22LQ6ZRQ5 1243 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 XYLT1Q86Y38 959 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 OSCP1Q8WVF1 389 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 P2RY11Q96G91 374 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 ABCC13Q9NSE7 274 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 DUS2Q9NX74 493 aaKnown RBP16.5■□□□□ 0.23
MBD1-207ENST00000398488 MARCH2Q9P0N8 246 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 WNT16Q9UBV4 365 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 STC2O76061 302 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 GJB6O95452 261 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 PRKCIP41743 596 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 ZBED6P86452 979 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 SPECC1LQ69YQ0 1117 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 TRNP1Q6NT89 227 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 RSRC2Q7L4I2 434 aaKnown RBP16.5■□□□□ 0.23
MBD1-207ENST00000398488 ERICH1Q86X53 443 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 FMNL3Q8IVF7 1028 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 IRF7Q92985 503 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 FAM149B1Q96BN6 582 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 ADAM33Q9BZ11 813 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 FBXL21Q9UKT6 434 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 CEP83Q9Y592 693 aa16.5■□□□□ 0.23
MBD1-207ENST00000398488 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.234e-8■■■□□ 15.9
MBD1-207ENST00000398488 NCAM1P13591 858 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 MMP8P22894 467 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 SLC6A3Q01959 620 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 MSANTD2Q6P1R3 559 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 TXNDC11Q6PKC3 985 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 DEFB106AQ8N104 65 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 DQX1Q8TE96 717 aaKnown RBP16.49■□□□□ 0.23
MBD1-207ENST00000398488 DNASE1L2Q92874 299 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 NOX5Q96PH1 765 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 C11orf70Q9BRQ4 267 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 TRPV5Q9NQA5 729 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 ARHGEF3Q9NR81 526 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 SEPT11Q9NVA2 429 aaKnown RBP16.49■□□□□ 0.23
MBD1-207ENST00000398488 THG1LQ9NWX6 298 aaKnown RBP16.49■□□□□ 0.23
MBD1-207ENST00000398488 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
MBD1-207ENST00000398488 MTF2Q9Y483 593 aaPredicted RBP16.49■□□□□ 0.23
MBD1-207ENST00000398488 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 TFE3P19532 575 aaPredicted RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 ZNF75DP51815 510 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 YWHAZP63104 245 aaKnown RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 CENPCQ03188 943 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 TBX2Q13207 712 aaPredicted RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 RUNX3Q13761 415 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 CC2D1AQ6P1N0 951 aaPredicted RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 Q6ZNB5 142 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 HTR3DQ70Z44 454 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 TAC4Q86UU9 113 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 ADGRG2Q8IZP9 1017 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 RNF139Q8WU17 664 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 SLC2A13Q96QE2 648 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 SYNCQ9H7C4 482 aa16.48■□□□□ 0.23
MBD1-207ENST00000398488 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
MBD1-207ENST00000398488 E2F8A0AVK6 867 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 PI15O43692 258 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TPM3P06753 285 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TNFAIP3P21580 790 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 IFNAR2P48551 515 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 PFKPQ01813 784 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TRIP4Q15650 581 aaPredicted RBP16.47■□□□□ 0.23
MBD1-207ENST00000398488 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
MBD1-207ENST00000398488 CWF19L1Q69YN2 538 aaKnown RBP16.47■□□□□ 0.23
MBD1-207ENST00000398488 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TRIM72Q6ZMU5 477 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TPRG1Q6ZUI0 275 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 SLC26A9Q7LBE3 791 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TMC6Q7Z403 805 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
MBD1-207ENST00000398488 SYN2Q92777 582 aaPredicted RBP16.47■□□□□ 0.23
MBD1-207ENST00000398488 FOXQ1Q9C009 403 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 ECT2Q9H8V3 914 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 SH3BP1Q9Y3L3 701 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■■■□ 20.8
MBD1-207ENST00000398488 PIAS3Q9Y6X2 628 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 MYOFQ9NZM1 2061 aa16.47■□□□□ 0.23
MBD1-207ENST00000398488 TMCO5BA8MYB1 307 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 SART1O43290 800 aaKnown RBP16.46■□□□□ 0.23
MBD1-207ENST00000398488 IGLV3-25P01717 112 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 CYP17A1P05093 508 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 CORO1AP31146 461 aaKnown RBP16.46■□□□□ 0.23
MBD1-207ENST00000398488 ADKP55263 362 aaKnown RBP16.46■□□□□ 0.23
MBD1-207ENST00000398488 STARD6P59095 220 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
MBD1-207ENST00000398488 EIF4EBP2Q13542 120 aaPredicted RBP16.46■□□□□ 0.23
MBD1-207ENST00000398488 PDGFRLQ15198 375 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 ITPRIPL2Q3MIP1 535 aa16.46■□□□□ 0.23
MBD1-207ENST00000398488 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms