RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HOXC6P09630 235 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ICAM3P32942 547 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PDK4Q16654 411 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 KIZQ2M2Z5 673 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 IARS2Q9NSE4 1012 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLC12A4Q9UP95 1085 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ADAMTS7Q9UKP4 1686 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 APOC4-APOC2K7ER74 178 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PPEF2O14830 753 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 NVLO15381 856 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 APOC2P02655 101 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 AVPR1AP37288 418 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLC6A3Q01959 620 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 N4BP2L1Q5TBK1 243 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SCUBE3Q8IX30 993 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 UNC5BQ8IZJ1 945 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CLEC4CQ8WTT0 213 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CNPY3Q9BT09 278 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 THTPAQ9BU02 230 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 FRMD8P1Q9BZ68 369 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PDLIM7Q9NR12 457 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PNPOQ9NVS9 261 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ANGPTL2Q9UKU9 493 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 GRID1Q9ULK0 1009 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CHKBQ9Y259 395 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF286BP0CG31 522 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PCSK2P16519 638 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SERPINB9P50453 376 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SATB1Q01826 763 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 BST1Q10588 318 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC14Q49A88 953 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF484Q5JVG2 852 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 MTMR14Q8NCE2 650 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 EXT2Q93063 718 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CADM1Q9BY67 442 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 STOML1Q9UBI4 398 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CLUHO75153 1309 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 M0QYT0 321 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 OPHN1O60890 802 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PSMG1O95456 288 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 LMNAP02545 664 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CSH1P0DML2 217 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CSH2P0DML3 217 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CALB2P22676 271 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CACNB2Q08289 660 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PEX6Q13608 980 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 STILQ15468 1287 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PYROXD2Q8N2H3 581 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CCNYL1Q8N7R7 359 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 MCUQ8NE86 351 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 C10orf82Q8WW14 230 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PGBD4Q96DM1 585 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CELF6Q96J87 481 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ACSS3Q9H6R3 686 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 GIMAP4Q9NUV9 329 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 TAGLN3Q9UI15 199 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CYB561D2O14569 222 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 IRF6O14896 467 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 USP12O75317 370 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 GCAP28676 217 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ASPHQ12797 758 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 KIAA0319LQ8IZA0 1049 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ARFGAP1Q8N6T3 406 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 POU5F2Q8N7G0 328 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 NKD2Q969F2 451 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 MTBPQ96DY7 904 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ERLEC1Q96DZ1 483 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PGLYRP2Q96PD5 576 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PLEKHA5Q9HAU0 1116 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PRKAG3Q9UGI9 489 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 TUBGCP4Q9UGJ1 667 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 TLK1Q9UKI8 766 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 MFHAS1Q9Y4C4 1052 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 STYXL1Q9Y6J8 313 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ATXN2Q99700 1313 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 HUS1O60921 280 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CILPO75339 1184 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CTSHP09668 335 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC130P13994 396 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 WLSQ5T9L3 541 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ADGRD1Q6QNK2 874 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ARMCX2Q7L311 632 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 CTU1Q7Z7A3 348 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SDCCAG8Q86SQ7 713 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ANKRD13AQ8IZ07 590 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 C12orf29Q8N999 325 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLCO2A1Q92959 643 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 C18orf25Q96B23 403 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF669Q96BR6 464 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 TIMMDC1Q9NPL8 285 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 ARHGEF3Q9NR81 526 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 METTL18O95568 372 aa5.1□□□□□ -1.59
SMAD4-202ENST00000398417 TFE3P19532 575 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms