RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SLC22A18Q96BI1 424 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 C3orf49Q96BT1 292 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 TCEANC2Q96MN5 208 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 GCNAQ96QF7 691 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 LBHD1Q9BQE6 289 aaPredicted RBP7.15□□□□□ -1.27
SMCO1-201ENST00000397537 PCED1AQ9H1Q7 454 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 MRPL44Q9H9J2 332 aaKnown RBP7.15□□□□□ -1.27
SMCO1-201ENST00000397537 LTB4R2Q9NPC1 389 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 PCDHB16Q9NRJ7 776 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 KCND3Q9UK17 655 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 ZMYND8Q9ULU4 1186 aaPredicted RBP7.15□□□□□ -1.27
SMCO1-201ENST00000397537 AURKCQ9UQB9 309 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 SHANK3Q9BYB0 1731 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 ATP8B3O60423 1300 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 PARD3Q8TEW0 1356 aa7.15□□□□□ -1.27
SMCO1-201ENST00000397537 A0A0G2JPF8 293 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 NPHP3-ACAD11A0A0J9YXS1 232 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 A0A1W2PRV1 198 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 HNRNPCL3B7ZW38 293 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 PYCARD-AS1I3L0S3 204 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 CCP110O43303 1012 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SLC25A17O43808 307 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TLR2O60603 784 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 PSMD10O75832 226 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TRIM16O95361 564 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 PAHP00439 452 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 AHSGP02765 367 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 HNRNPCL4P0DMR1 293 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 GAAP10253 952 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 CPA1P15085 419 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 PECAM1P16284 738 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SYN1P17600 705 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TYMPP19971 482 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 NFKBIAP25963 317 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 KLRK1P26718 216 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SDHAP31040 664 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 ICAM3P32942 547 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 ARL4DP49703 201 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 LUMP51884 338 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 EIF4A1P60842 406 aaKnown RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 COG7P83436 770 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TARDBPQ13148 414 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TTLL4Q14679 1199 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 HFEQ30201 348 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 BTBD16Q32M84 506 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 TTC22Q5TAA0 569 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 FAM83HQ6ZRV2 1179 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 C15orf52Q6ZUT6 534 aaKnown RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SYT13Q7L8C5 426 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 OR6C4Q8NGE1 309 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 BRIX1Q8TDN6 353 aaKnown RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 BCL7CQ8WUZ0 217 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 FAM84AQ96KN4 292 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 STRA6Q9BX79 667 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 VPS16Q9H269 839 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 MED4Q9NPJ6 270 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SIRT3Q9NTG7 399 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 ZNHIT6Q9NWK9 470 aaKnown RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 SRRDQ9UH36 339 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 CAB39Q9Y376 341 aaPredicted RBP7.14□□□□□ -1.27
SMCO1-201ENST00000397537 PCDHA5Q9Y5H7 936 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 IGSF1Q8N6C5 1336 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 NSD2O96028 1365 aa7.14□□□□□ -1.27
SMCO1-201ENST00000397537 VWA5AO00534 786 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MYO1BO43795 1136 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 PDE8BO95263 885 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SUPT20HL2P0C7V6 817 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MYBL1P10243 752 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MALP21145 153 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 KCNA5P22460 613 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 PTAFRP25105 342 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 PIP4K2AP48426 406 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CDC42EP1Q00587 391 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 PPARAQ07869 468 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 LBRQ14739 615 aaKnown RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 NOMO1Q15155 1222 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SUPT20HL1Q3ZLR7 823 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 EEF1DP3Q658K8 133 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 FAM117BQ6P1L5 589 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ANGPTL8Q6UXH0 198 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 MARK2Q7KZI7 788 aaKnown RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 LRRC43Q8N309 656 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 OR56A3Q8NH54 315 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ISL2Q96A47 359 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 FOXRED1Q96CU9 486 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 RAB3IPQ96QF0 476 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SYT17Q9BSW7 474 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SLC12A9Q9BXP2 914 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 INTS2Q9H0H0 1204 aaKnown RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 SMARCAD1Q9H4L7 1026 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 LIPT1Q9Y234 373 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 CLDN16Q9Y5I7 305 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TIMM13Q9Y5L4 95 aaPredicted RBP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 TRPV2Q9Y5S1 764 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMCO1-201ENST00000397537 ADGRB3O60242 1522 aa7.13□□□□□ -1.27
SMCO1-201ENST00000397537 NRKQ7Z2Y5 1582 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms