RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CLCNKBP51801 687 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 MAP3K7CLP57077 242 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 SARNPP82979 210 aaKnown RBP16.77■□□□□ 0.28
SNX6-202ENST00000396526 EFHC2Q5JST6 749 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 ANKMY2Q8IV38 441 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 B3GAT3O94766 335 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 STX2P32856 288 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 DEUP1Q05D60 604 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 PTK7Q13308 1070 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 ANKRD42Q8N9B4 389 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 SMC6Q96SB8 1091 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 CNGB3Q9NQW8 809 aa16.77■□□□□ 0.27
SNX6-202ENST00000396526 CASTOR2A6NHX0 329 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 CLDN5O00501 218 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 GABBR2O75899 941 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 IL4RP24394 825 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 CST5P28325 142 aaPredicted RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 TKTP29401 623 aaKnown RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 HEATR6Q6AI08 1181 aaKnown RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 FAM131BQ86XD5 332 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 PQLC3Q8N755 202 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 SMC1BQ8NDV3 1235 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 PSMC3IPQ9P2W1 217 aaPredicted RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 FETUBQ9UGM5 382 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 A0A0U1RQF3 1178 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 M0QYT0 321 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 IFNAR2P48551 515 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 GEMIN4P57678 1058 aaKnown RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 RASA2Q15283 850 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 SEPT7Q16181 437 aaKnown RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 CA9Q16790 459 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 ARL13BQ3SXY8 428 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 RAB6CQ53S08 254 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 AGMOQ6ZNB7 445 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 CLEC20AQ6ZU45 233 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 WNT8BQ93098 351 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 SMARCD1Q96GM5 515 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 SGSM3Q96HU1 749 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 UROC1Q96N76 676 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 PRMT1Q99873 361 aaKnown RBP16.76■□□□□ 0.27
SNX6-202ENST00000396526 ADAM2Q99965 735 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 RAB6CQ9H0N0 254 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 SQORQ9Y6N5 450 aa16.76■□□□□ 0.27
SNX6-202ENST00000396526 RBL1P28749 1068 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 MSH2P43246 934 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 GRIK3Q13003 919 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 MAPRE1Q15691 268 aaKnown RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 FBXO36Q8NEA4 188 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 GLT1D1Q96MS3 346 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 CCDC134Q9H6E4 229 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 AGO3Q9H9G7 860 aaKnown RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 CTNNAL1Q9UBT7 734 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 HACD1B0YJ81 288 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 AIF1P55008 147 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 MGAT3Q09327 533 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 RNF187Q5TA31 235 aaPredicted RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 KLHDC9Q8NEP7 349 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 CSPG4P5Q96PW8 444 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 CYTH2Q99418 400 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 SYNJ2BP-COX16A0A087WUM0 186 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 E7ESA3 106 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 F9P00740 461 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 IL9RQ01113 521 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 ANKRD22Q5VYY1 191 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 CCDC121Q6ZUS5 278 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 GSTCDQ8NEC7 633 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 RTP4Q96DX8 246 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 COX16Q9P0S2 106 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 SMG5Q9UPR3 1016 aaKnown RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 INPP5FQ9Y2H2 1132 aa16.75■□□□□ 0.27
SNX6-202ENST00000396526 TIMM13Q9Y5L4 95 aaPredicted RBP16.75■□□□□ 0.27
SNX6-202ENST00000396526 MEIS3P2A8K0S8 358 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 FASTKD3Q14CZ7 662 aaKnown RBP16.74■□□□□ 0.27
SNX6-202ENST00000396526 USP29Q9HBJ7 922 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 TSPY1Q01534 308 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 NME3Q13232 169 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 TUSC3Q13454 348 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 CCDC197Q8NCU1 140 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
SNX6-202ENST00000396526 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 MIOSQ9NXC5 875 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 FAM47DPA6NHR8 397 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 MYO1CO00159 1063 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 POMCP01189 267 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNX6-202ENST00000396526 UPP1Q16831 310 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 TFB1MQ8WVM0 346 aaKnown RBP16.74■□□□□ 0.27
SNX6-202ENST00000396526 SEC16BQ96JE7 1060 aa16.74■□□□□ 0.27
SNX6-202ENST00000396526 NPY6RQ99463 290 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms