RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZNF200P98182 395 aaPredicted RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 OASLQ15646 514 aaKnown RBP9.65□□□□□ -0.86
NDE1-201ENST00000396354 CA9Q16790 459 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 VWA5B1Q5TIE3 1220 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 IER5Q5VY09 327 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 RNF43Q68DV7 783 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 NDUFAF2Q8N183 169 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 DNAJC9Q8WXX5 260 aa9.65□□□□□ -0.86
NDE1-201ENST00000396354 I3L4J1 428 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 ALOX15BO15296 676 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 INSRRP14616 1297 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 YARSP54577 528 aaKnown RBP9.65□□□□□ -0.87
NDE1-201ENST00000396354 DPYSL3Q14195 570 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 KCTD2Q14681 263 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 CRYMQ14894 314 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 RASA2Q15283 850 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 ACSBG2Q5FVE4 666 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 SNX30Q5VWJ9 437 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 TSHZ1Q6ZSZ6 1077 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 ACOT1Q86TX2 421 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 PHF13Q86YI8 300 aaPredicted RBP9.65□□□□□ -0.87
NDE1-201ENST00000396354 WDR49Q8IV35 697 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 C1orf127Q8N9H9 656 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 RXFP2Q8WXD0 754 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 FAM149B1Q96BN6 582 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 FAXDC2Q96IV6 333 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 PEBP4Q96S96 227 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 EBF4Q9BQW3 602 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 DHX35Q9H5Z1 703 aaKnown RBP9.65□□□□□ -0.87
NDE1-201ENST00000396354 NMRK1Q9NWW6 199 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 GJD2Q9UKL4 321 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 SMG5Q9UPR3 1016 aaKnown RBP9.65□□□□□ -0.87
NDE1-201ENST00000396354 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.87
NDE1-201ENST00000396354 SCN1AP35498 2009 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 A0A087WZ62 844 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 TYROBPO43914 113 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 LCP1P13796 627 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 NCF2P19878 526 aaPredicted RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 ADORA2BP29275 332 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 RPL10AP62906 217 aaKnown RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 PLPPR4Q7Z2D5 763 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 RNF148Q8N7C7 305 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 LINC01465Q8N7H1 131 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 CCNYQ8ND76 341 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 DENND1AQ8TEH3 1009 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 AFG1LQ8WV93 481 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 TTC25Q96NG3 672 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 APOL2Q9BQE5 337 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 PCDH9Q9HC56 1237 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 MAN1C1Q9NR34 630 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 AK5Q9Y6K8 562 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 LGALS2P05162 132 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 ADORA2AP29274 412 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 SERPINB4P48594 390 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 BCAR1P56945 870 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 BST1Q10588 318 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 CFAP157Q5JU67 520 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 MPZL3Q6UWV2 235 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 DENND5BQ6ZUT9 1274 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 ZBTB8OSQ8IWT0 167 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 CCHCR1Q8TD31 782 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 CLEC4CQ8WTT0 213 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 PYDC1Q8WXC3 89 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 SLCO2A1Q92959 643 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 ANKRD36BP1Q96IX9 119 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 FAM49AQ9H0Q0 323 aaPredicted RBP9.64□□□□□ -0.87
NDE1-201ENST00000396354 SMYD2Q9NRG4 433 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 FIS1Q9Y3D6 152 aa9.64□□□□□ -0.87
NDE1-201ENST00000396354 LACTBL1A8MY62 500 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 ACKR2O00590 384 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 GPR37O15354 613 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SLC25A27O95847 323 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SNAI1O95863 264 aaPredicted RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 CYP3A5P20815 502 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TIE1P35590 1138 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NEK3P51956 506 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SLC25A3Q00325 362 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 PIGHQ14442 188 aaPredicted RBP9.63□□□□□ -0.87
NDE1-201ENST00000396354 TSNAXIP1Q2TAA8 658 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 ZNF792Q3KQV3 632 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 MARCH8Q5T0T0 291 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 TRIM72Q6ZMU5 477 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 KDELC2Q7Z4H8 507 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 LMNTD2Q8IXW0 634 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
NDE1-201ENST00000396354 LRMDAQ9H2I8 198 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms