RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC45A4Q5BKX6 768 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 RNF43Q68DV7 783 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 GBP7Q8N8V2 638 aaPredicted RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 B3GALNT2Q8NCR0 500 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 PPP1R10Q96QC0 940 aaKnown RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 KCTD15Q96SI1 283 aaPredicted RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 DUSP16Q9BY84 665 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 DHX35Q9H5Z1 703 aaKnown RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 SLC40A1Q9NP59 571 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 ETNK2Q9NVF9 386 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 RCOR3Q9P2K3 495 aaPredicted RBP17.44■□□□□ 0.38
NUP50-202ENST00000396096 STARD13Q9Y3M8 1113 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 USP3Q9Y6I4 520 aa17.44■□□□□ 0.38
NUP50-202ENST00000396096 KBTBD13C9JR72 458 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 PTGESO14684 152 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 DAB1O75553 588 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 KRT4P19013 534 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 HNRNPH1P31943 449 aaKnown RBP17.43■□□□□ 0.38
NUP50-202ENST00000396096 YWHAZP63104 245 aaKnown RBP17.43■□□□□ 0.38
NUP50-202ENST00000396096 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 ZKSCAN8Q15776 578 aaPredicted RBP17.43■□□□□ 0.38
NUP50-202ENST00000396096 FSCN1Q16658 493 aaKnown RBP17.43■□□□□ 0.38
NUP50-202ENST00000396096 TAF2Q6P1X5 1199 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 C17orf99Q6UX52 265 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 BNIPLQ7Z465 357 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 SLC44A1Q8WWI5 657 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 KCTD13Q8WZ19 329 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 LRRC39Q96DD0 335 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 QKIQ96PU8 341 aaKnown RBP eCLIP17.43■□□□□ 0.38
NUP50-202ENST00000396096 CSPG4P5Q96PW8 444 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 APBA2Q99767 749 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 PITPNM3Q9BZ71 974 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 GRID1Q9ULK0 1009 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
NUP50-202ENST00000396096 TCRBV9S1A1TA0A576 114 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 MANSC4A6NHS7 340 aaPredicted RBP17.42■□□□□ 0.38
NUP50-202ENST00000396096 GABRDO14764 452 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 FAM155BO75949 473 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 GSTA2P09210 222 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 ATXN1P54253 815 aaKnown RBP17.42■□□□□ 0.38
NUP50-202ENST00000396096 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
NUP50-202ENST00000396096 SLC25A52Q3SY17 297 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 CST9Q5W186 159 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 PIGZQ86VD9 579 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
NUP50-202ENST00000396096 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
NUP50-202ENST00000396096 MRRFQ96E11 262 aaKnown RBP17.42■□□□□ 0.38
NUP50-202ENST00000396096 TM9SF1O15321 606 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 C1QAP02745 245 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 TPSB2P20231 275 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 GBP2P32456 591 aaPredicted RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 MAGEA3P43357 314 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 GBE1Q04446 702 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 SLC10A2Q12908 348 aaPredicted RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 TPSAB1Q15661 275 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 CAND1Q86VP6 1230 aaKnown RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 RASAL3Q86YV0 1011 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 CCDC185Q8N715 623 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 BANPQ8N9N5 519 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 SOCS4Q8WXH5 440 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 NT5C3BQ969T7 300 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 PAIP2Q9BPZ3 127 aaKnown RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 ETNK1Q9HBU6 452 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 POPDC2Q9HBU9 364 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 FZD10Q9ULW2 581 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 TSC2P49815 1807 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 IQANK1A0A1B0GTG1 560 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 HACD1B0YJ81 288 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 KPNA6O60684 536 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 ATP2C2O75185 946 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 NPR3P17342 541 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 PTPN1P18031 435 aaKnown RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 SLC8A3P57103 927 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 CCDC15Q0P6D6 951 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 SF3A3Q12874 501 aaKnown RBP eCLIP17.41■□□□□ 0.38
NUP50-202ENST00000396096 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 SUGP1Q8IWZ8 645 aaKnown RBP17.41■□□□□ 0.38
NUP50-202ENST00000396096 OLFM3Q96PB7 478 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 RXFP1Q9HBX9 757 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 KLHL14Q9P2G3 628 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 TTLL3Q9Y4R7 772 aa17.41■□□□□ 0.38
NUP50-202ENST00000396096 CYB561D2O14569 222 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 TRDMT1O14717 391 aaKnown RBP17.4■□□□□ 0.38
NUP50-202ENST00000396096 EDF1O60869 148 aaKnown RBP17.4■□□□□ 0.38
NUP50-202ENST00000396096 DGKIO75912 1065 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 UBOX5O94941 541 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 CYP2B6P20813 491 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
NUP50-202ENST00000396096 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
NUP50-202ENST00000396096 MRPS6P82932 125 aaKnown RBP17.4■□□□□ 0.38
NUP50-202ENST00000396096 MTM1Q13496 603 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 KBTBD12Q3ZCT8 623 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
NUP50-202ENST00000396096 PAQR9Q6ZVX9 377 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms