RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 C9orf57Q5W0N0 161 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LRRC43Q8N309 656 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DNAJB3Q8WWF6 145 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CENPTQ96BT3 561 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FAM49BQ9NUQ9 324 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 NCKIPSDQ9NZQ3 722 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PACSIN2Q9UNF0 486 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RBM47A0AV96 593 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 XPO1O14980 1071 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 EVX2Q03828 476 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MBTD1Q05BQ5 628 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SLC35G1Q2M3R5 365 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RPAINQ86UA6 219 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 FAM172AQ8WUF8 416 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 DEPDC1BQ8WUY9 529 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 UCMAQ8WVF2 138 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KCTD13Q8WZ19 329 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 Q9H521 79 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 DDX43Q9NXZ2 648 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PCDHB5Q9Y5E4 795 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TACC3Q9Y6A5 838 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ATP1A2P50993 1020 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 STX1BP61266 288 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TMC3Q7Z5M5 1100 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM110Q86TL2 294 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NOP9Q86U38 636 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KLHL29Q96CT2 875 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 FAR2Q96K12 515 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SENP8Q96LD8 212 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 FAM8A1Q9UBU6 413 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGEF17Q96PE2 2063 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM191CA6NGB0 347 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 QSOX1O00391 747 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ARIH2O95376 493 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CRTAMO95727 393 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 UNGP13051 313 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ATP4AP20648 1035 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TKTL1P51854 596 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SLC18A1P54219 525 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CYP4A22Q5TCH4 519 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 JADE1Q6IE81 842 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MFSD5Q6N075 450 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TTC23LQ6PF05 361 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZC3H18Q86VM9 953 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LEMD2Q8NC56 503 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MYCBPAPQ8TBZ2 947 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HEMGNQ9BXL5 484 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 DCDC2Q9UHG0 476 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GTF2IRD1Q9UHL9 959 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 APOBEC2Q9Y235 224 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KDM1AO60341 852 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LSP1P33241 339 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PTK7Q13308 1070 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RASA2Q15283 850 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MAPRE2Q15555 327 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGAP15Q53QZ3 475 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LMBRD2Q68DH5 695 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZCCHC9Q8N567 271 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 C12orf50Q8NA57 414 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RXFP2Q8WXD0 754 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PTPRN2Q92932 1015 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GAD1Q99259 594 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 EPN3Q9H201 632 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF510Q9Y2H8 683 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CACNA1AO00555 2505 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PCNX1Q96RV3 2341 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 A0A0U1RQF3 1178 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM28A0A1B0GU29 152 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SORBS3O60504 671 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CSH1P0DML2 217 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CSH2P0DML3 217 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HOXB6P17509 224 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RFC1P35251 1148 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GRM3Q14832 879 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SLC45A4Q5BKX6 768 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CMASQ8NFW8 434 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RNF208Q9H0X6 261 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM161AQ9NX61 479 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SUN2Q9UH99 717 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RPS6KL1Q9Y6S9 549 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MYOFQ9NZM1 2061 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CKMP06732 381 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HSD17B3P37058 310 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MDH1P40925 334 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KLK7P49862 253 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HIRAP54198 1017 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM62Q0P6H9 643 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NME3Q13232 169 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CYP1B1Q16678 543 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LRRC57Q8N9N7 239 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SLC4A11Q8NBS3 891 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF398Q8TD17 642 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ENTPD7Q9NQZ7 604 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LMCD1Q9NZU5 365 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 XYLBO75191 536 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 AMHP03971 560 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PTPN1P18031 435 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ADORA2BP29275 332 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms