RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 CAV1Q03135 178 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ARL13BQ3SXY8 428 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 SLC39A12Q504Y0 691 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 EFHC1Q5JVL4 640 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 RAPH1Q70E73 1250 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 CD302Q8IX05 232 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 SPON2Q9BUD6 331 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 CNOT10Q9H9A5 744 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 MDM4O15151 490 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 OSTM1Q86WC4 334 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ANKRD52Q8NB46 1076 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 TACO1Q9BSH4 297 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ETNK2Q9NVF9 386 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 TSR3Q9UJK0 312 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 PPME1Q9Y570 386 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM189A1O60320 539 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 MTA2O94776 668 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 PNPLA4P41247 253 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 GRIA1P42261 906 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 CLDN10P78369 228 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 SARNPP82979 210 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 POU5F1Q01860 360 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 PTK7Q13308 1070 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 STILQ15468 1287 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 KIF2BQ8N4N8 673 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 PDCD6IPQ8WUM4 868 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 MAML1Q92585 1016 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 RNF157Q96PX1 679 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 PCMTD2Q9NV79 361 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 GPR32O75388 356 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 ENDOD1O94919 500 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 NPR3P17342 541 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PROZP22891 400 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 TNFRSF8P28908 595 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 HIBCHQ6NVY1 386 aaPredicted RBP16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 CROCCP2Q86T23 111 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 WNT8BQ93098 351 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 YJEFN3A6XGL0 299 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 E7ENQ6 273 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PMPCBO75439 489 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 JCHAINP01591 159 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 SETDB1Q15047 1291 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 SIX1Q15475 284 aaPredicted RBP16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 MAMDC4Q6UXC1 1216 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PCDHGC3Q9UN70 934 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 C2CD4BA6NLJ0 364 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 APOC4-APOC2K7ER74 178 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 APOC2P02655 101 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 RCN2Q14257 317 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PCDH18Q9HCL0 1135 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 SLCO1B3Q9NPD5 702 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 RNF186Q9NXI6 227 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 PSD3Q9NYI0 1048 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 KIAA1257Q9ULG3 409 aa16.48■□□□□ 0.23
SMARCD1-202ENST00000394963 LAMA3Q16787 3333 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 DUSP11O75319 330 aaKnown RBP16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 PCSK1P29120 753 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 STAT4Q14765 748 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 DEFB115Q30KQ5 88 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 KBTBD12Q3ZCT8 623 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 TIGD5Q53EQ6 642 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 AGBL2Q5U5Z8 902 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 ATAD1Q8NBU5 361 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM111AQ96PZ2 611 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 COMMD10Q9Y6G5 202 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 H3BRJ5 948 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 LPXNO60711 386 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 E2F5Q15329 346 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 MREGQ8N565 214 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 SLC25A41Q8N5S1 370 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 IPMKQ8NFU5 416 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 SH3GL2Q99962 352 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 TKTL2Q9H0I9 626 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 LHX5Q9H2C1 402 aa16.47■□□□□ 0.23
SMARCD1-202ENST00000394963 PCDH9Q9HC56 1237 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms