RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZNF806P0C7X5 589 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 BCKDHBP21953 392 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 TIE1P35590 1138 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ATP5C1P36542 298 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 EIF2DP41214 584 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 GRIA2P42262 883 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ZNF132P52740 706 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 SF3A2Q15428 464 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 CRY1Q16526 586 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 PLA2G2CQ5R387 149 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 C10orf120Q5SQS8 335 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 FOXR2Q6PJQ5 311 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 TXNDC5Q8NBS9 432 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 MDGA1Q8NFP4 955 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 OLIG1Q8TAK6 271 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ZC3H10Q96K80 434 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 TPSD1Q9BZJ3 242 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ULBP1Q9BZM6 244 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ARRDC1-AS1Q9H2J1 176 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ARHGEF4Q9NR80 690 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 CLIC5Q9NZA1 410 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 NAGPAQ9UK23 515 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 FBXO10Q9UK96 956 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 TSPAN16Q9UKR8 245 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 MMP17Q9ULZ9 603 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 SH3BP1Q9Y3L3 701 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ACACBO00763 2458 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 TPRP12270 2363 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 A0A1W2PQF6 199 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 YJEFN3A6XGL0 299 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 E7ENQ6 273 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 PSMA7O14818 248 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 CACNG3O60359 315 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 EPN2O95208 641 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 APBB3O95704 486 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 HMBSP08397 361 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 BRD2P25440 801 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TNFRSF4P43489 277 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 PLA2G4AP47712 749 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TKTL1P51854 596 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 MRPS21P82921 87 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 SHC2P98077 582 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 GAD2Q05329 585 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 EFEMP1Q12805 493 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 CAMK4Q16566 473 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 N4BP2L1Q5TBK1 243 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 STPG1Q5TH74 334 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 FYB2Q5VWT5 728 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TCEAL6Q6IPX3 200 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 ANO7Q6IWH7 933 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 DPY19L2P1Q6NXN4 242 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 PMF1Q6P1K2 205 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 LCLAT1Q6UWP7 414 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TPGS1Q6ZTW0 290 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 RRAGAQ7L523 313 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TERB1Q8NA31 727 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 RBBP8NLQ8NC74 664 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 EHBP1Q8NDI1 1231 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 SLC35F5Q8WV83 523 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 RLN3Q8WXF3 142 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 TCEAL3Q969E4 200 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 METTL14Q9HCE5 456 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 ACP6Q9NPH0 428 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 PLK2Q9NYY3 685 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 MBD1Q9UIS9 605 aaPredicted RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 DNMT3LQ9UJW3 386 aa9.3□□□□□ -0.92
ATG4A-205ENST00000394892 AGO1Q9UL18 857 aaKnown RBP9.3□□□□□ -0.92
ATG4A-205ENST00000394892 WASH3PC4AMC7 463 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 NEDD8-MDP1E9PL57 170 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 PIK3R2O00459 728 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 TM4SF5O14894 197 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 XPO1O14980 1071 aaKnown RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 RHOBTB1O94844 696 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ZBED1O96006 694 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 PENKP01210 267 aaPredicted RBP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 APODP05090 189 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 FYNP06241 537 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 VDRP11473 427 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 TYRP14679 529 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CD19P15391 556 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 PMLP29590 882 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 WASP42768 502 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 RGS7P49802 495 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 DGKEP52429 567 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 YWHAGP61981 247 aaKnown RBP eCLIP9.29□□□□□ -0.92
ATG4A-205ENST00000394892 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 PAK1Q13153 545 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ELF2Q15723 593 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 ANO4Q32M45 955 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
ATG4A-205ENST00000394892 SGO2Q562F6 1265 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms