RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 FBXO27Q8NI29 283 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 DTX3LQ8TDB6 740 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 NMRK1Q9NWW6 199 aa12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 MARCOQ9UEW3 520 aaPredicted RBP12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 MYO18AQ92614 2054 aaKnown RBP12.96□□□□□ -0.33
PPP3CB-204ENST00000394829 KRT37O76014 449 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 ZBED1O96006 694 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 PFKMP08237 780 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 CSH1P0DML2 217 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 CSH2P0DML3 217 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 BCAR1P56945 870 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 IGBP1P78318 339 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 KRT72Q14CN4 511 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 CCDC6Q16204 474 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 MUM1Q2TAK8 710 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 TRMT10BQ6PF06 316 aaKnown RBP12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 SPATA33Q96N06 139 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 IFT122Q9HBG6 1241 aa12.96□□□□□ -0.34
PPP3CB-204ENST00000394829 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SOCS7O14512 581 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 APOL1O14791 398 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 KLF11O14901 512 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 LINGO3P0C6S8 592 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 RARBP10826 455 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 TMPRSS15P98073 1019 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SH3D19Q5HYK7 790 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 TREML1Q86YW5 311 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 MPP5Q8N3R9 675 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 TEX9Q8N6V9 391 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 MAGEB5Q9BZ81 275 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PCDH18Q9HCL0 1135 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PPME1Q9Y570 386 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PPP2R3BQ9Y5P8 575 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 CAPN9O14815 690 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 TBX10O75333 385 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 IL1BP01584 269 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PRKCHP24723 683 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 TUBP50607 506 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 RPS6KA3P51812 740 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SLC10A6Q3KNW5 377 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 UNC5AQ6ZN44 842 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 RTP4Q96DX8 246 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 HMX2A2RU54 273 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 DPPA5A6NC42 116 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PSMG1O95456 288 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 METTL18O95568 372 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ENO1P06733 434 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ACADSP16219 412 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 FBXO16Q8IX29 292 aaPredicted RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ACAP3Q96P50 834 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SNRNP25Q9BV90 132 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 KLC2Q9H0B6 622 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 GBA2Q9HCG7 927 aaPredicted RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 PCMTD2Q9NV79 361 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 ZNF180Q9UJW8 692 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
PPP3CB-204ENST00000394829 SCN1AP35498 2009 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 H3BRJ5 948 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 I3L4J1 428 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 APOEP02649 317 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 VHLP40337 213 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 GRIA1P42261 906 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 ERFP50548 548 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 RAB27AP51159 221 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 VGLL4Q14135 290 aa12.94□□□□□ -0.34
PPP3CB-204ENST00000394829 TSNAXIP1Q2TAA8 658 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms