RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GCNT1Q02742 428 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 LLGL1Q15334 1064 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 BRDTQ58F21 947 aaPredicted RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 TICAM1Q8IUC6 712 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 KATNAL2Q8IYT4 538 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 PQLC1Q8N2U9 271 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 GPD1LQ8N335 351 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 MCPH1Q8NEM0 835 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 DDX1Q92499 740 aaKnown RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 PRPF18Q99633 342 aaKnown RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 UTP6Q9NYH9 597 aaKnown RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 IGSF9Q9P2J2 1179 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 CDH22Q9UJ99 828 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 AP4B1Q9Y6B7 739 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 IQANK1A0A1B0GTG1 560 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 ZNF701M0R085 212 aaPredicted RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 TEPSINQ96N21 525 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 ALG13Q9NP73 1137 aaKnown RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 GABBR1Q9UBS5 961 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 ANAPC7Q9UJX3 599 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 COQ6Q9Y2Z9 468 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 MYPNQ86TC9 1320 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 H0YCG3 227 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 LIASO43766 372 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 FAM189A1O60320 539 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 SERPINB6P35237 376 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
HOXC6-202ENST00000394331 MTMR2Q13614 643 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 BAATQ14032 418 aaPredicted RBP19.52■□□□□ 0.72
HOXC6-202ENST00000394331 RARS2Q5T160 578 aaKnown RBP19.52■□□□□ 0.72
HOXC6-202ENST00000394331 SLC39A4Q6P5W5 647 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 ELMSAN1Q6PJG2 1045 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 BSNDQ8WZ55 320 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 TTC17Q96AE7 1141 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 FAM111AQ96PZ2 611 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 SLC2A11Q9BYW1 496 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 POMPQ9Y244 141 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 SDR42E2A6NKP2 422 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 VWA5AO00534 786 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 DGAT1O75907 488 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 CAPNS1P04632 268 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 NR3C2P08235 984 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 PRDX6P30041 224 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 WASHC5Q12768 1159 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 DGKZQ13574 1117 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 TOPORSQ9NS56 1045 aaPredicted RBP19.52■□□□□ 0.72
HOXC6-202ENST00000394331 RNF146Q9NTX7 359 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 DRG1Q9Y295 367 aaKnown RBP19.52■□□□□ 0.72
HOXC6-202ENST00000394331 HEY1Q9Y5J3 304 aa19.52■□□□□ 0.72
HOXC6-202ENST00000394331 HNRNPDLO14979 420 aaKnown RBP19.52■□□□□ 0.71
HOXC6-202ENST00000394331 GRIN3BO60391 1043 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 BAIAP3O94812 1187 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 KLHL2O95198 593 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 KRT5P13647 590 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 DPEP1P16444 411 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 GLRA2P23416 452 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 BCAP31P51572 246 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 KCNC4Q03721 635 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 RABGAP1LQ5R372 815 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 PCGF5Q86SE9 256 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 ADCY4Q8NFM4 1077 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 BORCS5Q969J3 196 aa19.52■□□□□ 0.71
HOXC6-202ENST00000394331 C12orf65Q9H3J6 166 aaKnown RBP19.52■□□□□ 0.71
HOXC6-202ENST00000394331 S100A1P23297 94 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 HIF1AQ16665 826 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 MDH1BQ5I0G3 518 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 ZNF362Q5T0B9 420 aaPredicted RBP19.51■□□□□ 0.71
HOXC6-202ENST00000394331 EXD1Q8NHP7 514 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 CASP10Q92851 521 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 PPP1R10Q96QC0 940 aaKnown RBP19.51■□□□□ 0.71
HOXC6-202ENST00000394331 NRDE2Q9H7Z3 1164 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 SCHIP1Q9P0W5 487 aaPredicted RBP19.51■□□□□ 0.71
HOXC6-202ENST00000394331 ADAM23O75077 832 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 PSAPP07602 524 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 GSTT2P0CG29 244 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 GSTT2BP0CG30 244 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 RBP3P10745 1247 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 THRAP10827 490 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 ENTPD1P49961 510 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 TFDP1Q14186 410 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 POTEAQ6S8J7 498 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 MRRFQ96E11 262 aaKnown RBP19.51■□□□□ 0.71
HOXC6-202ENST00000394331 TRIM11Q96F44 468 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 INO80BQ9C086 356 aaPredicted RBP19.51■□□□□ 0.71
HOXC6-202ENST00000394331 C1orf112Q9NSG2 853 aa19.51■□□□□ 0.71
HOXC6-202ENST00000394331 E7ESA3 106 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ADCY6O43306 1168 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ARSEP51690 589 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 COPAP53621 1224 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 C16orf72Q14CZ0 275 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 EFTUD2Q15029 972 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOXC6-202ENST00000394331 TEX44Q53QW1 395 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 NEPROQ6NW34 567 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 DHX38Q92620 1227 aaKnown RBP19.5■□□□□ 0.71
HOXC6-202ENST00000394331 PALMDQ9NP74 551 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 SELENONQ9NZV5 590 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 SIRPGQ9P1W8 387 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
HOXC6-202ENST00000394331 PDGFRBP09619 1106 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms