RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DEFB107AQ8IZN7 70 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 WHRNQ9P202 907 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 CCNL1Q9UK58 526 aaPredicted RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 CSPG5O95196 566 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 IFNAR1P17181 557 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 PTH1RQ03431 593 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ZNF554Q86TJ5 538 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 GLYCTKQ8IVS8 523 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 GPRASP2Q96D09 838 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 NSMCE2Q96MF7 247 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ISCUQ9H1K1 167 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ZNF638Q14966 1978 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 IST1P53990 364 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 OTUD3Q5T2D3 398 aaPredicted RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 C12orf66Q96MD2 445 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 ERMAPQ96PL5 475 aaPredicted RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 BTDP43251 543 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 PTPN21Q16825 1174 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 TRIM2Q9C040 744 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 CLEC4AQ9UMR7 237 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 CHRM3P20309 590 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 RFX3P48380 749 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 GSSP48637 474 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 MROH9Q5TGP6 573 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.2
USP49-203ENST00000394253 MS4A14Q96JA4 679 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 KIAA0232Q92628 1395 aa13.77□□□□□ -0.2
USP49-203ENST00000394253 LCP1P13796 627 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 DLG4P78352 724 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 RBM20Q5T481 1227 aaKnown RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 ACOT12Q8WYK0 555 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 ARHGAP28Q9P2N2 729 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 CCDC154A6NI56 674 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 HIST1H2ABP04908 130 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 PRCPP42785 496 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 CDH4P55283 916 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 RALGDSQ12967 914 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 HIST3H2AQ7L7L0 130 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 HIST1H2ACQ93077 130 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 DGCR6LQ9BY27 220 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 TBC1D22BQ9NU19 505 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 ARPINQ7Z6K5 226 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 ESPL1Q14674 2120 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 PSMC5P62195 406 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 TCHHL1Q5QJ38 904 aaPredicted RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 SLC6A15Q9H2J7 730 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 CAPN10Q9HC96 672 aa13.77□□□□□ -0.21
USP49-203ENST00000394253 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
USP49-203ENST00000394253 SERPINA1P01009 418 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 DHFR2Q86XF0 187 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 SLC7A14Q8TBB6 771 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 GRIP2Q9C0E4 1043 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 ZNF221Q9UK13 617 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 MYOM2P54296 1465 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 PCM1Q15154 2024 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 RBP1P09455 135 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 OMPP47874 163 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 RPS8P62241 208 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 COASYQ13057 564 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 IRGCQ6NXR0 463 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 HPS6Q86YV9 775 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 LOC110117498-PIK3R3F6TDL0 507 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 PGRMC2O15173 223 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 CEBPGP53567 150 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 ZNF746Q6NUN9 644 aaPredicted RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 KBTBD7Q8WVZ9 684 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 REEP1Q9H902 201 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 GDF11O95390 407 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 HOXB6P17509 224 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 B3GALNT2Q8NCR0 500 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 CRLS1Q9UJA2 301 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 WRBO00258 174 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 GHRP10912 638 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 PTGER2P43116 358 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms