RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RHOT1Q8IXI2 618 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 UBL4BQ8N7F7 174 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 PDZD8Q8NEN9 1154 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 OVCA2Q8WZ82 227 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 PEBP4Q96S96 227 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 CLIC5Q9NZA1 410 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 COX16Q9P0S2 106 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 SAR1BQ9Y6B6 198 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 CCDC66A2RUB6 948 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 KCNK3O14649 394 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 PSTPIP1O43586 416 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 RARGP13631 454 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 IL1R2P27930 398 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 RBM10P98175 930 aaKnown RBP25.32■■□□□ 1.64
LRFN4-202ENST00000393952 RTL10Q7L3V2 364 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 RNF139Q8WU17 664 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 UBE2Q2Q8WVN8 375 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 OSBPL9Q96SU4 736 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 FAM204AQ9H8W3 233 aa25.32■■□□□ 1.64
LRFN4-202ENST00000393952 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.32■■□□□ 1.64
LRFN4-202ENST00000393952 ENDOD1O94919 500 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 TRUB2O95900 331 aaKnown RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 DEUP1Q05D60 604 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 NME3Q13232 169 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 HADHQ16836 314 aaKnown RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ATP13A4Q4VNC1 1196 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 SCYL2Q6P3W7 929 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 RSRC2Q7L4I2 434 aaKnown RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 HS6ST3Q8IZP7 471 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ELMOD1Q8N336 334 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 HDAC7Q8WUI4 952 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ZWILCHQ9H900 591 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 IL21Q9HBE4 155 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 TRPM5Q9NZQ8 1165 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 UXTQ9UBK9 157 aaPredicted RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 USP18Q9UMW8 372 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ZNF840PA6NDX5 716 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 TADA3O75528 432 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 RALAP11233 206 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 RDXP35241 583 aaKnown RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 GTF2F1P35269 517 aaKnown RBP eCLIP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 LRRC38Q5VT99 294 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 DCAF12L1Q5VU92 463 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 CYP4V2Q6ZWL3 525 aaPredicted RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 COG1Q8WTW3 980 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 CASP10Q92851 521 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ACSF2Q96CM8 615 aaPredicted RBP25.31■■□□□ 1.64
LRFN4-202ENST00000393952 NCAPGQ9BPX3 1015 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 PIGVQ9NUD9 493 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 DDIT4Q9NX09 232 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 SFMBT1Q9UHJ3 866 aa25.31■■□□□ 1.64
LRFN4-202ENST00000393952 ANAPC1Q9H1A4 1944 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 OBSL1O75147 1896 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 ZNF185O15231 689 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 PRPSAP2O60256 369 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 TBX18O95935 607 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 PRLRP16471 622 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 TCP1P17987 556 aaKnown RBP25.3■■□□□ 1.64
LRFN4-202ENST00000393952 SMTNL2Q2TAL5 461 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 ZNF697Q5TEC3 545 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 SNX30Q5VWJ9 437 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 MSANTD2Q6P1R3 559 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 TMEM150AQ86TG1 271 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 FAM131BQ86XD5 332 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 TMC8Q8IU68 726 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 PGAP3Q96FM1 320 aaPredicted RBP25.3■■□□□ 1.64
LRFN4-202ENST00000393952 LRRC3Q9BY71 257 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 SMOC2Q9H3U7 446 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 CCSER2Q9H7U1 834 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 KLHL11Q9NVR0 708 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.3■■□□□ 1.64
LRFN4-202ENST00000393952 DOCK6Q96HP0 2047 aa25.3■■□□□ 1.64
LRFN4-202ENST00000393952 MDM4O15151 490 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 IGLV3-25P01717 112 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 F11P03951 625 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 HOXA9P31269 272 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 RWDD2BP57060 319 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 POLNQ7Z5Q5 900 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 VN1R2Q8NFZ6 395 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 CORO1BQ9BR76 489 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 DPP7Q9UHL4 492 aa25.29■■□□□ 1.64
LRFN4-202ENST00000393952 MSI1O43347 362 aaKnown RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 TLR5O60602 858 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 HNRNPA1P09651 372 aaKnown RBP eCLIP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 ZNF211Q13398 564 aaPredicted RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 KCNT1Q5JUK3 1230 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 C10orf120Q5SQS8 335 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 CDCA3Q99618 268 aaPredicted RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 TTYH1Q9H313 450 aaPredicted RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 PRDM12Q9H4Q4 367 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 NSUN3Q9H649 340 aaKnown RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 IGFLR1Q9H665 355 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 WDR6Q9NNW5 1121 aaKnown RBP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 HCFC1R1Q9NWW0 138 aa25.28■■□□□ 1.64
LRFN4-202ENST00000393952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.28■■□□□ 1.64
LRFN4-202ENST00000393952 SPDYE4A6NLX3 237 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 IRAK2O43187 625 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 F9P00740 461 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 KRT7P08729 469 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 EFEMP1Q12805 493 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms