RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 ATAD1Q8NBU5 361 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.48■□□□□ 0.87
RAB5C-202ENST00000393860 NT5C3BQ969T7 300 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 RNF157Q96PX1 679 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 TMEM121Q9BTD3 319 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 CWH43Q9H720 699 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 MAP3K6O95382 1288 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 KRT14P02533 472 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 RFC2P35250 354 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 PGFP49763 221 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 CBX1P83916 185 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 OASLQ15646 514 aaKnown RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 SPOUT1Q5T280 376 aaKnown RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 PCDH19Q8TAB3 1148 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 SLC35B2Q8TB61 432 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 GPR152Q8TDT2 470 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FMO2Q99518 471 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 TMEM106CQ9BVX2 250 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 MTMR10Q9NXD2 777 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FZD10Q9ULW2 581 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 NEU2Q9Y3R4 380 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 PCDHB5Q9Y5E4 795 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 H3BQF6 201 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 TNFRSF10BO14763 440 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 ALDH7A1P49419 539 aaKnown RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 CTCFP49711 727 aaPredicted RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 DRG2P55039 364 aaKnown RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FAM182AQ5T1J6 154 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 BSPRYQ5W0U4 402 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 PM20D1Q6GTS8 502 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FAM43BQ6ZT52 329 aaPredicted RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 BNIPLQ7Z465 357 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 KRT222Q8N1A0 295 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 PQLC3Q8N755 202 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FAM204AQ9H8W3 233 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 FEZ2Q9UHY8 353 aaPredicted RBP20.47■□□□□ 0.87
RAB5C-202ENST00000393860 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 USP3Q9Y6I4 520 aa20.47■□□□□ 0.87
RAB5C-202ENST00000393860 ZNF638Q14966 1978 aaKnown RBP20.46■□□□□ 0.87
RAB5C-202ENST00000393860 APOC4-APOC2K7ER74 178 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 SGK1O00141 431 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 APOC2P02655 101 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 ATF2P15336 505 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 ADCY8P40145 1251 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 DPYSL2Q16555 572 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 NFE2Q16621 373 aaPredicted RBP20.46■□□□□ 0.87
RAB5C-202ENST00000393860 DRICH1Q6PGQ1 229 aaPredicted RBP20.46■□□□□ 0.87
RAB5C-202ENST00000393860 SYDE1Q6ZW31 735 aaPredicted RBP20.46■□□□□ 0.87
RAB5C-202ENST00000393860 ALLCQ8N6M5 410 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 TTPALQ9BTX7 342 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 VN1R3Q9BXE9 311 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 VIPAS39Q9H9C1 493 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 PNPLA8Q9NP80 782 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 DDIT4Q9NX09 232 aa20.46■□□□□ 0.87
RAB5C-202ENST00000393860 OR6C75A6NL08 312 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 AMHP03971 560 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 IVDP26440 423 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 EIF3EP60228 445 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 RNF19BQ6ZMZ0 732 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 TTC13Q8NBP0 860 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 LRRN4Q8WUT4 740 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 IRGQQ8WZA9 623 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 NKD2Q969F2 451 aaPredicted RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 SNF8Q96H20 258 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ANLNQ9NQW6 1124 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 HEY1Q9Y5J3 304 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 APOL1O14791 398 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 IFNB1P01574 187 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 GOT1P17174 413 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 RPL17P18621 184 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 KLRC2P26717 231 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 HSPA9P38646 679 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 GDF10P55107 478 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 WDR5P61964 334 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 DHX9Q08211 1270 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 TFDP2Q14188 446 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 TAC4Q86UU9 113 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ZC3H18Q86VM9 953 aaKnown RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 PLD5Q8N7P1 536 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 FAM71BQ8TC56 605 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 RIN2Q8WYP3 895 aaPredicted RBP20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ART4Q93070 314 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ZNF670Q9BS34 389 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 CRISPLD1Q9H336 500 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 MFHAS1Q9Y4C4 1052 aa20.45■□□□□ 0.86
RAB5C-202ENST00000393860 ABHD14A-ACY1A0A1B0GW23 586 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 MTMR11A4FU01 709 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 C2CD2LO14523 706 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 KIAA0355O15063 1070 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 ADAM12O43184 909 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 RRP9O43818 475 aaKnown RBP20.44■□□□□ 0.86
RAB5C-202ENST00000393860 VNN2O95498 520 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 ITGAVP06756 1048 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 ITGA8P53708 1063 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 YWHAGP61981 247 aaKnown RBP eCLIP20.44■□□□□ 0.86
RAB5C-202ENST00000393860 CALCOCO2Q13137 446 aa20.44■□□□□ 0.86
RAB5C-202ENST00000393860 TMC3Q7Z5M5 1100 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms