RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 UNC13DQ70J99 1090 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 ACOT1Q86TX2 421 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 SLC2A14Q8TDB8 520 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 ZNF419Q96HQ0 510 aaPredicted RBP16.24■□□□□ 0.19
CHMP3-202ENST00000393773 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
CHMP3-202ENST00000393773 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 CACNA2D2Q9NY47 1150 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 NYNRINQ9P2P1 1898 aaKnown RBP16.24■□□□□ 0.19
CHMP3-202ENST00000393773 CYP26A1O43174 497 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 SH3BP5O60239 455 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 PHACTR2O75167 634 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 SYPP08247 313 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 CISD3P0C7P0 127 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 DGKGP49619 791 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 SLC14A1Q13336 389 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 BIRC3Q13489 604 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 STK38Q15208 465 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 PLEKHG6Q3KR16 790 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 Q6ZNB5 142 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 NAXDQ8IW45 347 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 FBXO44Q9H4M3 255 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
CHMP3-202ENST00000393773 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
CHMP3-202ENST00000393773 FAM49BQ9NUQ9 324 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
CHMP3-202ENST00000393773 SUSD2Q9UGT4 822 aa16.23■□□□□ 0.19
CHMP3-202ENST00000393773 NUMA1Q14980 2115 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 HHLA1C9JL84 531 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 GFRA2O00451 464 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 SPTLC2O15270 562 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 FTH1P19P0C7X4 201 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 NDST1P52848 882 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 MAP3K7CLP57077 242 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 AMPD3Q01432 767 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 GRIK2Q13002 908 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 TRIP6Q15654 476 aaKnown RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 SHC4Q6S5L8 630 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 TPGS1Q6ZTW0 290 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 ADAMTS14Q8WXS8 1223 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 NMUR1Q9HB89 426 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 USP36Q9P275 1121 aaKnown RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 WDR35Q9P2L0 1181 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 LSM7Q9UK45 103 aaKnown RBP16.22■□□□□ 0.19
CHMP3-202ENST00000393773 SCML2Q9UQR0 700 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 GPSM3Q9Y4H4 160 aa16.22■□□□□ 0.19
CHMP3-202ENST00000393773 BPTFQ12830 3046 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 WASH3PC4AMC7 463 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 MDM4O15151 490 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 EXOC3O60645 756 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 PPP6R2O75170 966 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 RDXP35241 583 aaKnown RBP16.21■□□□□ 0.19
CHMP3-202ENST00000393773 ATP5C1P36542 298 aaKnown RBP16.21■□□□□ 0.19
CHMP3-202ENST00000393773 ASPAP45381 313 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 AP3M2P53677 418 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 GOLGA8FQ08AF8 430 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 GOLGA8DPQ0D2H9 430 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.19
CHMP3-202ENST00000393773 SDE2Q6IQ49 451 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 KLHDC10Q6PID8 442 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 KIAA1324Q6UXG2 1013 aaKnown RBP16.21■□□□□ 0.19
CHMP3-202ENST00000393773 CLEC20AQ6ZU45 233 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 RGL4Q8IZJ4 473 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 CRYBG2Q8N1P7 616 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 C12orf29Q8N999 325 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 FOXJ1Q92949 421 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 FBXO10Q9UK96 956 aa16.21■□□□□ 0.19
CHMP3-202ENST00000393773 ZBTB24O43167 697 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 CUTAO60888 179 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 CBFA2T3O75081 653 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 NDUFS2O75306 463 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 CLSTN1O94985 981 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 FAM200BP0CF97 657 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 MAOBP27338 520 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 CD6P30203 668 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 DLG4P78352 724 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 SCAPQ12770 1279 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 ENPP2Q13822 863 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 ZACNQ401N2 412 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 FUT11Q495W5 492 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 SYCP2LQ5T4T6 812 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 METTL3Q86U44 580 aaKnown RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 UNC93AQ86WB7 457 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 DNASE2BQ8WZ79 361 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 BHMTQ93088 406 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 INTS4Q96HW7 963 aaKnown RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 TWNKQ96RR1 684 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 MKRN2Q9H000 416 aaKnown RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-202ENST00000393773 PLK2Q9NYY3 685 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms