RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 PKMYT1Q99640 499 aa21.09■□□□□ 0.97
ME3-202ENST00000393324 SEZ6LQ9BYH1 1024 aa21.09■□□□□ 0.97
ME3-202ENST00000393324 FOXP3Q9BZS1 431 aa21.09■□□□□ 0.97
ME3-202ENST00000393324 MTMR10Q9NXD2 777 aa21.09■□□□□ 0.97
ME3-202ENST00000393324 HEY1Q9Y5J3 304 aa21.09■□□□□ 0.97
ME3-202ENST00000393324 TYMPP19971 482 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 CYP2F1P24903 491 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 MORF4L2Q15014 288 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 SKIDA1Q1XH10 827 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 RNASEH2BQ5TBB1 312 aaKnown RBP21.08■□□□□ 0.97
ME3-202ENST00000393324 AGBL2Q5U5Z8 902 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 OTUD1Q5VV17 481 aaPredicted RBP21.08■□□□□ 0.97
ME3-202ENST00000393324 B4GALNT4Q76KP1 1039 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 TBC1D13Q9NVG8 400 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 KANSL3Q9P2N6 904 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 NAALADL1Q9UQQ1 740 aa21.08■□□□□ 0.97
ME3-202ENST00000393324 SYNJ2BP-COX16A0A087WUM0 186 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 M0QYT0 321 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 CAPN9O14815 690 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 TTC4O95801 387 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 NR1D1P20393 614 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 RPL22P35268 128 aaKnown RBP21.08■□□□□ 0.96
ME3-202ENST00000393324 TSPY1Q01534 308 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 KYNUQ16719 465 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 COLGALT2Q8IYK4 626 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 DBF4BQ8NFT6 615 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 DEFB118Q96PH6 123 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 KCTD15Q96SI1 283 aaPredicted RBP21.08■□□□□ 0.96
ME3-202ENST00000393324 RBM15Q96T37 977 aaKnown RBP eCLIP21.08■□□□□ 0.96
ME3-202ENST00000393324 NRDE2Q9H7Z3 1164 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 TMEM161AQ9NX61 479 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 COX16Q9P0S2 106 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 PCDHB8Q9UN66 801 aa21.08■□□□□ 0.96
ME3-202ENST00000393324 H7C0C1 242 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 NDC80O14777 642 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 ZBED1O96006 694 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 FYNP06241 537 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 STIP1P31948 543 aaKnown RBP21.07■□□□□ 0.96
ME3-202ENST00000393324 OR1G1P47890 313 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 ATP5OP48047 213 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 YWHAHQ04917 246 aaPredicted RBP21.07■□□□□ 0.96
ME3-202ENST00000393324 GPNMBQ14956 572 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 MAPRE1Q15691 268 aaKnown RBP21.07■□□□□ 0.96
ME3-202ENST00000393324 BNIPLQ7Z465 357 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 FZD10Q9ULW2 581 aa21.07■□□□□ 0.96
ME3-202ENST00000393324 RRP15Q9Y3B9 282 aaKnown RBP21.07■□□□□ 0.96
ME3-202ENST00000393324 TLDC2A0PJX2 215 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 TRIM66O15016 1216 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 RDXP35241 583 aaKnown RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 CTCFP49711 727 aaPredicted RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 ATP1A2P50993 1020 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 NME3Q13232 169 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 CEP128Q6ZU80 1094 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 CTU1Q7Z7A3 348 aaKnown RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 PCGF5Q86SE9 256 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 RELL1Q8IUW5 271 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 FAM193BQ96PV7 902 aaPredicted RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 PAK6Q9NQU5 681 aaPredicted RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 NOVA2Q9UNW9 492 aaKnown RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 SHOC2Q9UQ13 582 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 TET1Q8NFU7 2136 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 ENPP3O14638 875 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 DEUP1Q05D60 604 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 MTFR1Q15390 333 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 PLEKHG4Q58EX7 1191 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 KDM7AQ6ZMT4 941 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 PYROXD2Q8N2H3 581 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 CSPG4P5Q96PW8 444 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 TMEM109Q9BVC6 243 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 DMAP1Q9NPF5 467 aaPredicted RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 NINJ2Q9NZG7 142 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 DNAJB4Q9UDY4 337 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 PRG3Q9Y2Y8 225 aaPredicted RBP21.06■□□□□ 0.96
ME3-202ENST00000393324 PTPRDP23468 1912 aa21.06■□□□□ 0.96
ME3-202ENST00000393324 SMIM23A6NLE4 172 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 MAP3K6O95382 1288 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 LTFP02788 710 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 IVLP07476 585 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 COL6A1P12109 1028 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 HPDP32754 393 aaPredicted RBP21.05■□□□□ 0.96
ME3-202ENST00000393324 NRLP54845 237 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 SKOR1P84550 965 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 PSTKQ8IV42 348 aaKnown RBP21.05■□□□□ 0.96
ME3-202ENST00000393324 SLC7A14Q8TBB6 771 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 PIGVQ9NUD9 493 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 FARP1Q9Y4F1 1045 aaPredicted RBP21.05■□□□□ 0.96
ME3-202ENST00000393324 NLRC5Q86WI3 1866 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 TMEM189-UBE2V1I3L0A0 370 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 NCAM1P13591 858 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 EMC10Q5UCC4 262 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 CROCCP2Q86T23 111 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 TAB3Q8N5C8 712 aaPredicted RBP21.05■□□□□ 0.96
ME3-202ENST00000393324 PRCCQ92733 491 aaPredicted RBP21.05■□□□□ 0.96
ME3-202ENST00000393324 C9orf72Q96LT7 481 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 CAPS2Q9BXY5 557 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 PCDHB7Q9Y5E2 793 aa21.05■□□□□ 0.96
ME3-202ENST00000393324 ZFXP17010 805 aaPredicted RBP21.04■□□□□ 0.96
ME3-202ENST00000393324 GOT1P17174 413 aa21.04■□□□□ 0.96
ME3-202ENST00000393324 ARL4AP40617 200 aa21.04■□□□□ 0.96
ME3-202ENST00000393324 MAGEA4P43358 317 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms