RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 PBX1P40424 430 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 HTR3AP46098 478 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TUBA4AP68366 448 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TFF2Q03403 129 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 DEUP1Q05D60 604 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 MTAPQ13126 283 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 FHL3Q13643 280 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 ACOX1Q15067 660 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 FAM187BQ17R55 369 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 C4orf46Q504U0 113 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMEM63BQ5T3F8 832 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMTC4Q5T4D3 741 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMEM65Q6PI78 240 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 CHSY1Q86X52 802 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 SAMD3Q8N6K7 520 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 SEMA6DQ8NFY4 1073 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 MAFAQ8NHW3 353 aaPredicted RBP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 IPO4Q8TEX9 1081 aaKnown RBP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMEM41AQ96HV5 264 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 RITA1Q96K30 269 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 CCDC17Q96LX7 622 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 ASB2Q96Q27 587 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 WDR24Q96S15 920 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 MPHOSPH6Q99547 160 aaKnown RBP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 CINPQ9BW66 212 aaPredicted RBP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 USP29Q9HBJ7 922 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 ASIC5Q9NY37 505 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 CDC23Q9UJX2 597 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 ASAP1Q9ULH1 1129 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 MAGED2Q9UNF1 606 aaPredicted RBP3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 LRCH1Q9Y2L9 728 aa3.6□□□□□ -1.83
RNU6-550P-201ENST00000391057 OR2W5A6NFC9 320 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 TISP43B9A030 160 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMEM232C9JQI7 657 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 PLA2G6O60733 806 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 MT-CO3P00414 261 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 C21orf58P58505 322 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 RHBDL3P58872 404 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 MRPS21P82921 87 aaKnown RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 CFHR3Q02985 330 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 CCDC15Q0P6D6 951 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 KCNB1Q14721 858 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 LARS2Q15031 903 aaKnown RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 RAB30Q15771 203 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 P3H1Q32P28 736 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 AASDHQ4L235 1098 aaPredicted RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 TMEM196Q5HYL7 178 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 GRHL2Q6ISB3 625 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 TLDC1Q6P9B6 456 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 VSTM1Q6UX27 236 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 ZNF782Q6ZMW2 699 aaPredicted RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 DCDC5Q6ZRR9 648 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 TTC30AQ86WT1 665 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 RASGRP3Q8IV61 690 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 LINC01465Q8N7H1 131 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 C12orf76Q8N812 135 aaPredicted RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 ADAMTS18Q8TE60 1221 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 NTN5Q8WTR8 489 aaPredicted RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 C18orf8Q96DM3 657 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 EDC3Q96F86 508 aaKnown RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 EIF3CQ99613 913 aaKnown RBP3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 CA14Q9ULX7 337 aa3.59□□□□□ -1.83
RNU6-550P-201ENST00000391057 ABHD14A-ACY1A0A1B0GW23 586 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 TCRBV5S1A1TA0A578 114 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 WIPF3A6NGB9 483 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 PRRT4C9JH25 899 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 CBFA2T3O75081 653 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 RNF8O76064 485 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 GLP2RO95838 553 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 TMIGD3P0DMS9 266 aaPredicted RBP3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 GSTM5P46439 218 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 GPC5P78333 572 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 TNFAIP2Q03169 654 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 OS9Q13438 667 aaPredicted RBP3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 BFSP2Q13515 415 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 DNASE1L3Q13609 305 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 MFSD13AQ14CX5 517 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 CC2D1BQ5T0F9 858 aaKnown RBP3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 C1orf228Q6PIY5 440 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 SKAP1Q86WV1 359 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 ZNF575Q86XF7 245 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 FAM71DQ8N9W8 422 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 DPF1Q92782 380 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 NUDT22Q9BRQ3 303 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 TTLL2Q9BWV7 592 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 VPS45Q9NRW7 570 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 HELLSQ9NRZ9 838 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 ADARB2Q9NS39 739 aaKnown RBP3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 FZD4Q9ULV1 537 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 MAFFQ9ULX9 164 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 DAAM1Q9Y4D1 1078 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 DTNAQ9Y4J8 743 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
RNU6-550P-201ENST00000391057 A0A087WV62 115 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 GOLGA6L3A6NEY3 463 aa3.57□□□□□ -1.84
RNU6-550P-201ENST00000391057 H3BNC9 293 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms