RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SLC35B2Q8TB61 432 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PUM2Q8TB72 1066 aaKnown RBP eCLIP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MDM1Q8TC05 714 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 BCAS4Q8TDM0 211 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GRHL3Q8TE85 626 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SSC4DQ8WTU2 575 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF480Q8WV37 535 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SORCS1Q8WY21 1168 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CENPIQ92674 756 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 RASL10AQ92737 203 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MSI2Q96DH6 328 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CEP95Q96GE4 821 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MARS2Q96GW9 593 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 POM121Q96HA1 1249 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MPP4Q96JB8 637 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SEC16BQ96JE7 1060 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SERAC1Q96JX3 654 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 HIST1H2AHQ96KK5 128 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FRMD6Q96NE9 622 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ASB16Q96NS5 453 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 OSBPL9Q96SU4 736 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MAP3K14Q99558 947 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TM9SF2Q99805 663 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 HIST1H2AJQ99878 128 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 JPH2Q9BR39 696 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 WDR83Q9BRX9 315 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ALG1Q9BT22 464 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 THAP7Q9BT49 309 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PHF20Q9BVI0 1012 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ELOVL1Q9BW60 279 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SCNM1Q9BWG6 230 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TEX13BQ9BXU2 312 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 YTHDF1Q9BYJ9 559 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PITHD1Q9GZP4 211 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC25A18Q9H1K4 315 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MRPL46Q9H2W6 279 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CATSPERBQ9H7T0 1116 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PHAXQ9H814 394 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PDFQ9HBH1 243 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PLAC1Q9HBJ0 212 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MAGEE1Q9HCI5 957 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FBRSL1Q9HCM7 1045 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FGF22Q9HCT0 170 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 INPP5EQ9NRR6 644 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DUSP22Q9NRW4 184 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNH7Q9NS40 1196 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TNFRSF19Q9NS68 423 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CATSPERZQ9NTU4 200 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 OCIAD1Q9NX40 245 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 THYN1Q9P016 225 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TAAR2Q9P1P5 351 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MALT1Q9UDY8 824 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PRODH2Q9UF12 536 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 EPHA6Q9UF33 1036 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 IL17BQ9UHF5 180 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 RASAL2Q9UJF2 1139 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBE1Q9UJT0 475 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CCNL1Q9UK58 526 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 KLK12Q9UKR0 248 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 AGO2Q9UKV8 859 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CDYLQ9Y232 598 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 VSIG4Q9Y279 399 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DAAM1Q9Y4D1 1078 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TNPO3Q9Y5L0 923 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 NPFFR2Q9Y5X5 522 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC12A7Q9Y666 1083 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 RPTORQ8N122 1335 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 COL15A1P39059 1388 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZMYM3Q14202 1370 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DOPEY1Q5JWR5 2465 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ROBO2Q9HCK4 1378 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PTCH1Q13635 1447 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LRP2P98164 4655 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV7-46A0A075B6I9 117 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV5-37A0A075B6J1 123 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IGHV4OR15-8A0A075B7B6 117 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IGKV3D-11A0A0A0MRZ8 115 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KIR2DS5A0A0G2JLQ3 304 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A1W2PPC1 479 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A1W2PPR1 153 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TCRBV5S4A2TA0A5A2 114 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 UBA6A0AVT1 1052 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF840PA6NDX5 716 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MBD3L4A6NDZ8 208 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MBD3L3A6NE82 208 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GAGE12JA6NER3 117 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LILRA5A6NI73 299 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MBD3L5A6NJ08 208 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 A6NNZ2 444 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 COLCA2A8K830 154 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GSG1L2A8MUP6 293 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 E7ENX8 843 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 F5H697 171 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 C16orf97H3BN30 126 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 H3BRB1 525 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF561-AS1K7EIQ3 104 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ARNTLO00327 626 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms