RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 USP36Q9P275 1121 aaKnown RBP22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 LSM7Q9UK45 103 aaKnown RBP22.59■■□□□ 1.21
CNEP1R1-201ENST00000389134 WASH3PC4AMC7 463 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 BCAT2O15382 392 aaPredicted RBP22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 FLRT2O43155 660 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 GREM1O60565 184 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 CISD3P0C7P0 127 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 OXTRP30559 389 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 TRPC3Q13507 836 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 SCUBE3Q8IX30 993 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 CCDC65Q8IXS2 484 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 KLF16Q9BXK1 252 aaPredicted RBP22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 FBXO44Q9H4M3 255 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 TLR8Q9NR97 1041 aaKnown RBP22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 SRPRBQ9Y5M8 271 aaKnown RBP22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 STON1Q9Y6Q2 735 aa22.58■■□□□ 1.21
CNEP1R1-201ENST00000389134 PTPRQQ9UMZ3 2332 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 A0A087WV48 116 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 TRABD2BA6NFA1 517 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 METTL12A8MUP2 240 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 NPC1O15118 1278 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 ATXN1LP0C7T5 689 aaKnown RBP22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 ATICP31939 592 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 CYP4F3Q08477 520 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 SNRNP35Q16560 246 aaKnown RBP22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 HLA-BQ31612 363 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 FUT11Q495W5 492 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 DCAF12L1Q5VU92 463 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 PAQR9Q6ZVX9 377 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 RHBDD1Q8TEB9 315 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 CGRRF1Q99675 332 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 NXF1Q9UBU9 619 aaKnown RBP22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 FNDC3AQ9Y2H6 1198 aaKnown RBP22.57■■□□□ 1.2
CNEP1R1-201ENST00000389134 ATP5C1P36542 298 aaKnown RBP22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 STAT6P42226 847 aa22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 PSMD6Q15008 389 aa22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 SUZ12Q15022 739 aaKnown RBP22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 RABEP1Q15276 862 aa22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 RDH13Q8NBN7 331 aa22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 SYAP1Q96A49 352 aaPredicted RBP22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 TNIP3Q96KP6 325 aa22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 FBXO2Q9UK22 296 aaPredicted RBP22.56■■□□□ 1.2
CNEP1R1-201ENST00000389134 AP1G2O75843 785 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 TBX18O95935 607 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 TPMTP51580 245 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 MYL6P60660 151 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 BNC1Q01954 994 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 NUP58Q9BVL2 599 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 MKRN2Q9H000 416 aaKnown RBP22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 FBXO10Q9UK96 956 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 CLIC4Q9Y696 253 aa22.55■■□□□ 1.2
CNEP1R1-201ENST00000389134 TP53BP1Q12888 1972 aaPredicted RBP22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 KCNJ18B7U540 433 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 ZIC2O95409 532 aaPredicted RBP22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 CYP24A1Q07973 514 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 C19orf57Q0VDD7 668 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 CAMK2BQ13554 666 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 E2F5Q15329 346 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 TMPRSS6Q8IU80 811 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 PDCD7Q8N8D1 485 aaKnown RBP22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 ADAM32Q8TC27 787 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 UCMAQ8WVF2 138 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 CCDC127Q96BQ5 260 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 SIPA1Q96FS4 1042 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 CLIC6Q96NY7 704 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 TRIM9Q9C026 710 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 XYLT2Q9H1B5 865 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 CYLDQ9NQC7 956 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 KRT82Q9NSB4 513 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 THAP10Q9P2Z0 257 aaPredicted RBP22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 EIF2B4Q9UI10 523 aaKnown RBP22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 SLC27A6Q9Y2P4 619 aa22.54■■□□□ 1.2
CNEP1R1-201ENST00000389134 SYNCRIPO60506 623 aaKnown RBP22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 IGLV3-19P01714 112 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 HOXD13P35453 343 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 PGFP49763 221 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 ENPP2Q13822 863 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 FUKQ8N0W3 1084 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 ZMIZ2Q8NF64 920 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 C1orf216Q8TAB5 229 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 PRCCQ92733 491 aaPredicted RBP22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 UBL7Q96S82 380 aaPredicted RBP22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 PCED1AQ9H1Q7 454 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 SMYD3Q9H7B4 428 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 VRTNQ9H8Y1 702 aa22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.53■■□□□ 1.2
CNEP1R1-201ENST00000389134 GOLGA8CPA6NN73 597 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 E9PAM4 449 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 EIF3DO15371 548 aaKnown RBP eCLIP22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 TNFSF14O43557 240 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 ACO1P21399 889 aaKnown RBP22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 PLA2G4AP47712 749 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 CDH8P55286 799 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 KLHDC10Q6PID8 442 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 ZNF516Q92618 1163 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 BHMTQ93088 406 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 SMOQ99835 787 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 PANK2Q9BZ23 570 aa22.52■■□□□ 1.2
CNEP1R1-201ENST00000389134 CSNK1G1Q9HCP0 422 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms