RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 GATA5Q9BWX5 397 aaPredicted RBP2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 SLC25A32Q9H2D1 315 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 AS3MTQ9HBK9 375 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 NECTIN3Q9NQS3 549 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 VPS45Q9NRW7 570 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 TFCP2L1Q9NZI6 479 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 ZNF70Q9UC06 446 aaPredicted RBP2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 ASAP1Q9ULH1 1129 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 CA14Q9ULX7 337 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 PHTF1Q9UMS5 762 aa2.75□□□□□ -1.97
RNU6-541P-201ENST00000384709 E5RJQ4 531 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 HNRNPDLO14979 420 aaKnown RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 PRC1O43663 620 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 EXOC3O60645 756 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 SNX2O60749 519 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 PRR35P0CG20 571 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMEM225BP0DP42 221 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 DUSP1P28562 367 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 EPHB2P29323 1055 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 ATICP31939 592 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 EZH2Q15910 746 aaKnown RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 SLC35G1Q2M3R5 365 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 ARL13BQ3SXY8 428 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 CERKLQ49MI3 558 aaPredicted RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 KLHDC7AQ5VTJ3 777 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 IZUMO3Q5VZ72 239 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 CRTC1Q6UUV9 634 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 OR2C3Q8N628 320 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 PNLDC1Q8NA58 520 aaKnown RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 GLIS1Q8NBF1 620 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 SVIPQ8NHG7 77 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 BCAS4Q8TDM0 211 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 PIGOQ8TEQ8 1089 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 ABHD5Q8WTS1 349 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 COQ8BQ96D53 544 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 RIPOR3Q96MK2 946 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 RNF26Q9BY78 433 aaPredicted RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAGEB5Q9BZ81 275 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 PRSS22Q9GZN4 317 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 TBC1D23Q9NUY8 699 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 RGL1Q9NZL6 768 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMOD4Q9NZQ9 345 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 CCNL1Q9UK58 526 aaPredicted RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 SCAF8Q9UPN6 1271 aaKnown RBP2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 FAM50BQ9Y247 325 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 DTNAQ9Y4J8 743 aa2.74□□□□□ -1.97
RNU6-541P-201ENST00000384709 SPATA31A5Q5VU36 1347 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 SPATA31A7Q8IWB4 1347 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 WDR17Q8IZU2 1322 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 SMIM35A0A1B0GVV1 85 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMEM232C9JQI7 657 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 FCHO1O14526 889 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 NCK2O43639 380 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 PLA2G6O60733 806 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 PRAMEF2O60811 474 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 COQ9O75208 318 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 NTSR2O95665 410 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 GLP2RO95838 553 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 KELP23276 732 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 TNFSF4P23510 183 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 NTSR1P30989 418 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 ITGA8P53708 1063 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 KRTAP10-11P60412 298 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 TXNL4AP83876 142 aaKnown RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 CFHR1Q03591 330 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 STK3Q13188 491 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 TWIST1Q15672 202 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAPKAPK3Q16644 382 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 MPEG1Q2M385 716 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 TRIM71Q2Q1W2 868 aaKnown RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 FAM209BQ5JX69 171 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 FAXCQ5TGI0 409 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 RRAGBQ5VZM2 374 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 ARL6IP4Q66PJ3 421 aaKnown RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 RAP1GAP2Q684P5 730 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 SLC18B1Q6NT16 456 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 VSTM1Q6UX27 236 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 CLEC9AQ6UXN8 241 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 DCDC5Q6ZRR9 648 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 CCDC28AQ8IWP9 274 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 C11orf44Q8N8P7 122 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAFAQ8NHW3 353 aaPredicted RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 DEPTORQ8TB45 409 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 WIPF2Q8TF74 440 aaPredicted RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 DDB2Q92466 427 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 GJA10Q969M2 543 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 HIC2Q96JB3 615 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 VPS50Q96JG6 964 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 SGCZQ96LD1 299 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 C5orf34Q96MH7 638 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 QTRT1Q9BXR0 403 aaKnown RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 STK33Q9BYT3 514 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 KCNK9Q9NPC2 374 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 LPAR3Q9UBY5 353 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 ZMYND8Q9ULU4 1186 aaPredicted RBP2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAFFQ9ULX9 164 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAN2B2Q9Y2E5 1009 aa2.73□□□□□ -1.97
RNU6-541P-201ENST00000384709 SMIM22K7EJ46 135 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 TP73O15350 636 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms